RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SPACA5Q96QH8 159 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 ABCB10Q9NRK6 738 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 CHCHD3Q9NX63 227 aaKnown RBP9.57□□□□□ -0.88
VRK1-204ENST00000555351 IL36GQ9NZH8 169 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 CNOT2Q9NZN8 540 aaKnown RBP9.57□□□□□ -0.88
VRK1-204ENST00000555351 OR6C3Q9NZP0 311 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.57□□□□□ -0.88
VRK1-204ENST00000555351 TCF19Q9Y242 345 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 ZNF281Q9Y2X9 895 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 A0A087X0M5 115 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 A0A1B0GX30 115 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 ODAMA1E959 279 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 A6NDX4 124 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 ZNF729A6NN14 1252 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 SLC33A1O00400 549 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 CASQ2O14958 399 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 DEGS1O15121 323 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 GPX5O75715 221 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 ZNF44P15621 663 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 HTR1DP28221 377 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 GTF2A1P52655 376 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 TAS2R43P59537 309 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 BDH1Q02338 343 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 DYNC1I2Q13409 638 aaKnown RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 SSX2Q16385 188 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 YIF1BQ5BJH7 314 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 RNF144BQ7Z419 303 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 TRAPPC6BQ86SZ2 158 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 TPRX1Q8N7U7 411 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 ZNF485Q8NCK3 441 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 CNIH3Q8TBE1 160 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 ZNF596Q8TC21 504 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 CYGBQ8WWM9 190 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 TMEM106AQ96A25 262 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 IFT22Q9H7X7 185 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 TMEM138Q9NPI0 162 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 PCDHB16Q9NRJ7 776 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 PLCXD1Q9NUJ7 323 aa9.56□□□□□ -0.88
VRK1-204ENST00000555351 PAK1IP1Q9NWT1 392 aaPredicted RBP9.56□□□□□ -0.88
VRK1-204ENST00000555351 TRBV5-5A0A0J9YX44 114 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 FAM90A22PA8MWA6 464 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 GABRPO00591 440 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CHST1O43916 411 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 IGLV1-47P01700 117 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CD1AP06126 327 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CAPGP40121 348 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CEACAM3P40198 252 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 PTGFRP43088 359 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 GLIPR1P48060 266 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 SNU13P55769 128 aaKnown RBP9.55□□□□□ -0.88
VRK1-204ENST00000555351 PPP3R1P63098 170 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 AESQ08117 197 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 HERPUD1Q15011 391 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 RCN1Q15293 331 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 FAM189A2Q15884 450 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 LY6EQ16553 131 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 LRRC36Q1X8D7 754 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 C2orf68Q2NKX9 166 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 KRBOX4Q5JUW0 171 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 LDLRAD2Q5SZI1 272 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 OGFRL1Q5TC84 451 aaPredicted RBP9.55□□□□□ -0.88
VRK1-204ENST00000555351 OR2G6Q5TZ20 316 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 XAF1Q6GPH4 301 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 Q6ZTK2 550 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 C16orf82Q7Z2V1 217 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 LINC00596Q86U02 117 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 C8orf59Q8N0T1 100 aaPredicted RBP9.55□□□□□ -0.88
VRK1-204ENST00000555351 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 ABHD12Q8N2K0 398 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 ZNF565Q8N9K5 539 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 OR4D6Q8NGJ1 314 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 OR4P4Q8NGL7 312 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 FBLIM1Q8WUP2 373 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 TNFAIP8L1Q8WVP5 186 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 CFHR4Q92496 578 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 THRSPQ92748 146 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 COQ2Q96H96 371 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 GPER1Q99527 375 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 BARHL1Q9BZE3 327 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 DPM3Q9P2X0 92 aa9.55□□□□□ -0.88
VRK1-204ENST00000555351 MEGF11A6BM72 1044 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 H0YJX3 145 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 ZNF780AO75290 641 aaPredicted RBP9.54□□□□□ -0.88
VRK1-204ENST00000555351 CLIC3O95833 236 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 CGB3P0DN86 165 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 CGB7P0DN87 165 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 CALCBP10092 127 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 FSTP19883 344 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 CDK2P24941 298 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 BDKRB2P30411 391 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 SOX2P48431 317 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 ST3GAL4Q11206 333 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 RSU1Q15404 277 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 Q499Y3 187 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms