RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 AUNIPQ9H7T9 357 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 HES4Q9HCC6 221 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 PCDHB16Q9NRJ7 776 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 CLN8Q9UBY8 286 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 RBMX2Q9Y388 322 aaKnown RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 A0A0A6YYH2 397 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 TRAV20A0A0B4J274 112 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 A6NJ64 397 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 F5H0A9 414 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 NDUFB3O43676 98 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 CD5LO43866 347 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 ORC5O43913 435 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF780AO75290 641 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 CRTAPO75718 401 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 HTR3BO95264 441 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 KNG1P01042 644 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 CHRM2P08172 466 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 MGMTP16455 207 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 BCL3P20749 454 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 TALDO1P37837 337 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 GABRA2P47869 451 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 ERVK11-1P61568 191 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 IL13RA1P78552 427 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 HOXA4Q00056 320 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 CDNFQ49AH0 187 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 LRRC10Q5BKY1 277 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 SPIN3Q5JUX0 258 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM69Q5SWH9 247 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 BAIAP2L2Q6UXY1 529 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 GDPD3Q7L5L3 318 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 OR8H2Q8N162 312 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 FAM58AQ8N1B3 248 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 BATF2Q8N1L9 274 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 SEH1LQ96EE3 360 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 C1orf159Q96HA4 380 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 MED30Q96HR3 178 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 NUDT16L1Q9BRJ7 211 aaKnown RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 DIABLOQ9NR28 239 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 RBFOX1Q9NWB1 397 aaKnown RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 RABL2AQ9UBK7 228 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-218ENST00000555213 KAAG1Q9UBP8 84 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 KCNS2Q9ULS6 477 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 RABL2BQ9UNT1 228 aa9.09□□□□□ -0.95
SHMT2-218ENST00000555213 A0A1B0GVG6 124 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 A8MXK9 166 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 FAM157AC9JC47 383 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 GABARAPH6UMI1 98 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 HAX1O00165 279 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 SSX5O60225 188 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 TGFAP01135 160 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 CSTBP04080 98 aaKnown RBP9.08□□□□□ -0.96
SHMT2-218ENST00000555213 WNT2P09544 360 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 CD3GP09693 182 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 SPNP16150 400 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 PRKACAP17612 351 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 SERPINA2P20848 420 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 RFX2P48378 723 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 PITPNAQ00169 270 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 IKZF1Q13422 519 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 GPR176Q14439 515 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 OXA1LQ15070 435 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 ATPAF1Q5TC12 328 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-218ENST00000555213 CD276Q5ZPR3 534 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 OLFML2AQ68BL7 652 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 FAM216BQ8N7L0 139 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 OR5T2Q8NGG2 359 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 OR51T1Q8NGJ9 327 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 ANGPTL6Q8NI99 470 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 GPX8Q8TED1 209 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 SMIM4Q8WVI0 70 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 CCL13Q99616 98 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 TMEM59Q9BXS4 323 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 ZMAT3Q9HA38 289 aaKnown RBP9.08□□□□□ -0.96
SHMT2-218ENST00000555213 KLK11Q9UBX7 282 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 OR14J1Q9UGF5 321 aa9.08□□□□□ -0.96
SHMT2-218ENST00000555213 ACANP16112 2415 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 IGKV1D-17A0A075B6S4 117 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 METTL21EPA6NDL7 271 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 RFPL4AA6NLU0 287 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 RFPL4AL1F8VTS6 287 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 GPR37O15354 613 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 SIGLEC5O15389 551 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 LY6G6DO95868 133 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 ECDO95905 644 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-218ENST00000555213 PSG2P11465 335 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 GTF2F2P13984 249 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 GNB3P16520 340 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 GATA3P23771 443 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 PRDX2P32119 198 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 DVL1P1P54792 670 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-218ENST00000555213 LCN2P80188 198 aa9.07□□□□□ -0.96
SHMT2-218ENST00000555213 KLF9Q13886 244 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms