RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 FPR2P25090 351 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 LMO1P25800 156 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 PAX6P26367 422 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 GLIPR1P48060 266 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 AESQ08117 197 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 ATXN7L3Q14CW9 347 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-214ENST00000554928 SLC22A6Q4U2R8 563 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 FIP1L1Q6UN15 594 aaKnown RBP10.1□□□□□ -0.79
SYNE2-214ENST00000554928 BAIAP2L2Q6UXY1 529 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF782Q6ZMW2 699 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-214ENST00000554928 GDPD3Q7L5L3 318 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-214ENST00000554928 TMEM104Q8NE00 496 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 OR51T1Q8NGJ9 327 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-214ENST00000554928 SUCNR1Q9BXA5 334 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 METTL9Q9H1A3 318 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 BANF2Q9H503 90 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 IL36GQ9NZH8 169 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 TRAV39A0A0B4J263 110 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 MGST3O14880 152 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 GEMIN2O14893 280 aaKnown RBP10.09□□□□□ -0.79
SYNE2-214ENST00000554928 SRMP19623 302 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 PRTN3P24158 256 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 COX7A1P24310 79 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 MAPK3P27361 379 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-214ENST00000554928 GDNFP39905 211 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 P2RX3P56373 397 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 RBM11P57052 281 aaKnown RBP10.09□□□□□ -0.79
SYNE2-214ENST00000554928 IL13RA2Q14627 380 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 HSD17B12Q53GQ0 312 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 UTF1Q5T230 341 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 UBE2UQ5VVX9 321 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 AWAT2Q6E213 333 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 OR10K2Q6IF99 312 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF773Q6PK81 442 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 USP43Q70EL4 1123 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 OSR2Q8N2R0 312 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 CPNE2Q96FN4 548 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-214ENST00000554928 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 DMRTB1Q96MA1 342 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 C19orf24Q9BVV8 132 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 YTHDF1Q9BYJ9 559 aaKnown RBP10.09□□□□□ -0.79
SYNE2-214ENST00000554928 RHOFQ9HBH0 211 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 ST3GAL6Q9Y274 331 aa10.09□□□□□ -0.79
SYNE2-214ENST00000554928 C17orf98A8MV24 154 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 PSMB9P28065 219 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 GABRA5P31644 462 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 BMXP51813 675 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 UBA52P62987 128 aaKnown RBP10.08□□□□□ -0.8
SYNE2-214ENST00000554928 TAF9Q16594 264 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 LDLRAD2Q5SZI1 272 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 LIAT1Q6ZQX7 453 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 C1orf122Q6ZSJ8 110 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 RTN4RL2Q86UN3 420 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 OR5D13Q8NGL4 314 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 METTL8Q9H825 291 aaKnown RBP10.08□□□□□ -0.8
SYNE2-214ENST00000554928 UNKLQ9H9P5 680 aaKnown RBP10.08□□□□□ -0.8
SYNE2-214ENST00000554928 TCF7L1Q9HCS4 588 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 TNFRSF19Q9NS68 423 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 NDUFB11Q9NX14 153 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 GLS2Q9UI32 602 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 AK6Q9Y3D8 172 aaKnown RBP10.08□□□□□ -0.8
SYNE2-214ENST00000554928 LRRC42Q9Y546 428 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 COL6A5A8TX70 2615 aa10.08□□□□□ -0.8
SYNE2-214ENST00000554928 NPFFO15130 113 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 MRPS14O60783 128 aaKnown RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 ZNF728P0DKX0 622 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 CD37P11049 281 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 ERP29P30040 261 aaKnown RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 BAMBIQ13145 260 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 SCGB2A2Q13296 93 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 KCTD21Q4G0X4 260 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 PAN3Q58A45 887 aaKnown RBP10.07□□□□□ -0.8
SYNE2-214ENST00000554928 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 KRBOX4Q5JUW0 171 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 PRAMEF5Q5TYX0 476 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 CDH26Q8IXH8 852 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 SVOPQ8N4V2 548 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 NKAIN3Q8N8D7 197 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 SUMF2Q8NBJ7 301 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 TBC1D15Q8TC07 691 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 PHYHIPQ92561 330 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 FAM46BQ96A09 425 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 SLC25A28Q96A46 364 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 PRDM13Q9H4Q3 707 aa10.07□□□□□ -0.8
SYNE2-214ENST00000554928 A0A0A6YYJ9 748 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 ODAMA1E959 279 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 FAM172BPA6NC97 362 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms