RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PPP1R7Q15435 360 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TAF9Q16594 264 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 HADHQ16836 314 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM183BQ1AE95 376 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 C18orf21Q32NC0 220 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM255AQ5JRV8 349 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 Q6P435 159 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RNASEKQ6P5S7 137 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM107Q6UX40 140 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TIFABQ6ZNK6 161 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PEX26Q7Z412 305 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 WDFY1Q8IWB7 410 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CDH26Q8IXH8 852 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM183AQ8IXX5 376 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PLPP5Q8NEB5 264 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SPATA4Q8NEY3 305 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CLDND2Q8NHS1 167 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 KCNG3Q8TAE7 436 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PLPPR1Q8TBJ4 325 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MARCH1Q8TCQ1 289 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF721Q8TF20 911 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 GIMAP1Q8WWP7 306 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 GEMIN6Q8WXD5 167 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM54Q969K7 222 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 FAM104AQ969W3 186 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SGK3Q96BR1 496 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 AURKBQ96GD4 344 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RNF157Q96PX1 679 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SH3GL3Q99963 347 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TBL1YQ9BQ87 522 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 OSBPL10Q9BXB5 764 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 AICDAQ9GZX7 198 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 STMN4Q9H169 189 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TRABDQ9H4I3 376 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TRIM45Q9H8W5 580 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RNF122Q9H9V4 155 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SLCO1B3Q9NPD5 702 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 FBXO6Q9NRD1 293 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CTPS2Q9NRF8 586 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MED11Q9P086 117 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 NUP50Q9UKX7 468 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 C15orf41Q9Y2V0 281 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RRP15Q9Y3B9 282 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF337Q9Y3M9 751 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CSDC2Q9Y534 153 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 NACAE9PAV3 2078 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DNAH7Q8WXX0 4024 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 TNCP24821 2201 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 NUP214P35658 2090 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 IGLV11-55A0A075B6I3 123 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 IGLV3-16A0A075B6K0 115 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 A0A0G2JMP0 313 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 A0A0X1KG70 313 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 A0A1W2PRD5 423 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 A0A1W2PRF3 423 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 A0A1W2PRM7 423 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 GOLGA6L10A6NI86 522 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF716A6NP11 495 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 B4DSR2 109 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 GOLGA6L19H0YKK7 550 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 K7EIL1 84 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 TXNDC9O14530 226 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 TP53I11O14683 189 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 PRMT5O14744 637 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 PPP1R2P9O14990 202 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 SPOPO43791 374 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 SS18L1O75177 396 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 EIF3GO75821 320 aaKnown RBP eCLIP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CIB2O75838 187 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 VAPBO95292 243 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 BGLAPP02818 100 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CATP04040 527 aaKnown RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CRYGBP07316 175 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 OR4A8P0C604 315 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 RHOXF2BP0C7M4 288 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF735P0CB33 412 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 SMIM10L1P0DMW3 83 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 RPS2P15880 293 aaKnown RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CPN2P22792 545 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 KDELR1P24390 212 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CXCL5P42830 114 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 SSR2P43308 183 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 HCAR3P49019 387 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 GPX6P59796 221 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 HERVK_113P61574 105 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CCL8P80075 99 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 HMGCS1Q01581 520 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF92Q03936 586 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC74AQ0VAA2 488 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ECH1Q13011 328 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 PIGHQ14442 188 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 SLC9A3R2Q15599 337 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 RSPO1Q2MKA7 263 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF791Q3KP31 576 aaPredicted RBP0.96□□□□□ -2.26
PRPF39-208ENST00000554785 VPS26BQ4G0F5 336 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 CCDC183Q5T5S1 534 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 TSPO2Q5TGU0 170 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 AGBL2Q5U5Z8 902 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF470Q6ECI4 717 aa0.96□□□□□ -2.26
PRPF39-208ENST00000554785 BHLHA15Q7RTS1 189 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms