RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 AMDHD2Q9Y303 409 aa4.9□□□□□ -1.63
ATXN3-230ENST00000554673 ETV7Q9Y603 341 aa4.9□□□□□ -1.63
ATXN3-230ENST00000554673 USF3Q68DE3 2245 aa4.9□□□□□ -1.63
ATXN3-230ENST00000554673 COL12A1Q99715 3063 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CR1P17927 2039 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ANKRD20A5PA0PJZ0 165 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 OR2AT4A6NND4 320 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 FAM25AB3EWG3 89 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 FAM25CB3EWG5 89 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 FAM25GB3EWG6 89 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 C16orf97H3BN30 126 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 H7C417 338 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PDCD5O14737 125 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 GOSR1O95249 250 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 IGHV1-46P01743 117 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 IGHV3-13P01766 116 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 MT-ND4P03905 459 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 HIST1H1DP16402 221 aaKnown RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 SERPINA2P20848 420 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CFL1P23528 166 aaKnown RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 GCH1P30793 250 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PITPNBP48739 271 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ASCL1P50553 236 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ART1P52961 327 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 UBE2NP61088 152 aaKnown RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 IL18Q14116 193 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 HERPUD1Q15011 391 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 TAF9Q16594 264 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 TBC1D28Q2M2D7 210 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF181Q2M3W8 571 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CEACAM21Q3KPI0 293 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PYDC2Q56P42 97 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PLCXD3Q63HM9 321 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 GLT8D1Q68CQ7 371 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF660Q6AZW8 331 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ELP2Q6IA86 826 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 C11orf71Q6IPW1 123 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 HAGHLQ6PII5 290 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CCBE1Q6UXH8 406 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 WDR82Q6UXN9 313 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 MRPL21Q7Z2W9 205 aaKnown RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 OR2W3Q7Z3T1 314 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 DPPA2Q7Z7J5 298 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 COMMD2Q86X83 199 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CDH26Q8IXH8 852 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 FBXL14Q8N1E6 418 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 Q8N402 240 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 GCSAMQ8N6F7 178 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CD177Q8N6Q3 437 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 GDPD1Q8N9F7 314 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PXT1Q8NFP0 134 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 NUDT10Q8NFP7 164 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 OR8G5Q8NG78 346 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 OR4C16Q8NGL9 310 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 OR10R2Q8NGX6 335 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 S100ZQ8WXG8 99 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 AKAP1Q92667 903 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PTX4Q96A99 478 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 NUDT11Q96G61 164 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 HIST1H2AAQ96QV6 131 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 SLC6A7Q99884 636 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 NRIP2Q9BQI9 281 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 THAP7Q9BT49 309 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 DCTN5Q9BTE1 182 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 SELENOIQ9C0D9 397 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 SLITRK2Q9H156 845 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 RGCCQ9H4X1 137 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 CDH20Q9HBT6 801 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 HRASLSQ9HDD0 168 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATXN3-230ENST00000554673 PCDHB16Q9NRJ7 776 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 MTFP1Q9UDX5 166 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF222Q9UK12 451 aa4.89□□□□□ -1.63
ATXN3-230ENST00000554673 IGKV1D-17A0A075B6S4 117 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 GABARAPH6UMI1 98 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ABCD4O14678 606 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 AKR7A2O43488 359 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CRTAPO75718 401 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 LY6HO94772 140 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 LHBP01229 141 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CD74P04233 296 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CD2P06729 351 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 HCKP08631 526 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 PGA5P0DJD9 388 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 ARSBP15848 533 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 PTBP1P26599 531 aaKnown RBP eCLIP4.88□□□□□ -1.634e-18■■■■■ 40.6
ATXN3-230ENST00000554673 SLC6A1P30531 599 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 GLRXP35754 106 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 SNU13P55769 128 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 MTCP1P56278 107 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 RBM11P57052 281 aaKnown RBP4.88□□□□□ -1.63
ATXN3-230ENST00000554673 TGFBR3Q03167 851 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 PLP2Q04941 152 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 CDNFQ49AH0 187 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 AWAT2Q6E213 333 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 PYHIN1Q6K0P9 492 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 Q6ZTK2 550 aa4.88□□□□□ -1.63
ATXN3-230ENST00000554673 SLC36A1Q7Z2H8 476 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms