RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 A6NLC8 198 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 OR2AT4A6NND4 320 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 LILRA1O75019 489 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 PAX6P26367 422 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF561Q8N587 486 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 ADAD2Q8NCV1 583 aaKnown RBP10.07□□□□□ -0.8
SHMT2-212ENST00000554467 OR56B1Q8NGI3 324 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 OR4K15Q8NH41 348 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 MEGF10Q96KG7 1140 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 TCEAL7Q9BRU2 100 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 SLC34A2O95436 690 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 NPY4RP50391 375 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 MDP1Q86V88 176 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 PRDM13Q9H4Q3 707 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 UFSP2Q9NUQ7 469 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF701Q9NV72 531 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-212ENST00000554467 hCG_1809904A0A1W2PP81 198 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 A0A1W2PR64 198 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 A0A1W2PRV1 198 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 CSTBP04080 98 aaKnown RBP10.06□□□□□ -0.8
SHMT2-212ENST00000554467 SFTPBP07988 381 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 CHRM2P08172 466 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 RBP2P50120 134 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 NUBP1P53384 320 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
SHMT2-212ENST00000554467 ALKBH2Q6NS38 261 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF383Q8NA42 475 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 C1QTNF5Q9BXJ0 243 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 OR2S2Q9NQN1 319 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 ESPL1Q14674 2120 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 IGKV1D-8A0A087WSZ0 117 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 RPL36A-HNRNPH2H7BZ11 118 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 MFNGO00587 321 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 MELTFP08582 738 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 CPT2P23786 658 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 FBXW9Q5XUX1 488 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 BEND4Q6ZU67 534 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 TMED6Q8WW62 240 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 ARL11Q969Q4 196 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 PIK3IP1Q96FE7 263 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 FAAP24Q9BTP7 215 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 PECRQ9BY49 303 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 FN3KRPQ9HA64 309 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 FBLN5Q9UBX5 448 aa10.06□□□□□ -0.8
SHMT2-212ENST00000554467 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 GEMIN2O14893 280 aaKnown RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 NPBWR2P48146 333 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 GPM6AP51674 278 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 FOXF2Q12947 444 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 VWA1Q6PCB0 445 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 RHOFQ9HBH0 211 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 CYTL1Q9NRR1 136 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 PLEKHJ1Q9NW61 149 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 DAOP14920 347 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 AMY2BP19961 511 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 WNT5AP41221 380 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 SSBP1Q04837 148 aaKnown RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 CYB5R2Q6BCY4 276 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF585AQ6P3V2 769 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 MRPL21Q7Z2W9 205 aaKnown RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 FBXL14Q8N1E6 418 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 INO80EQ8NBZ0 244 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 SLC25A21Q9BQT8 299 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 FGF23Q9GZV9 251 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 ROS1P08922 2347 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF891A8MT65 544 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 F8VVB4 439 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 F8VWA3 439 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 YIF1AO95070 293 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 OPRM1P35372 400 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 CASP6P55212 293 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 OR2B8PP59922 312 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 PLP2Q04941 152 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 CNN3Q15417 329 aaKnown RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 Q6ZSR3 168 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 SLC25A26Q70HW3 274 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 C9orf106Q8NAJ2 232 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 POM121L2Q96KW2 1035 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 ALX4Q9H161 411 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-212ENST00000554467 HRH4Q9H3N8 390 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 CACFD1Q9UGQ2 172 aa10.05□□□□□ -0.8
SHMT2-212ENST00000554467 A0A0B4J2A0 478 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 A0A1W2PPH5 198 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms