RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SPIN3Q5JUX0 258 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 C1orf100Q5SVJ3 147 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 FAM201AQ5SY85 155 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 STUMQ69YW2 141 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SFRP4Q6FHJ7 346 aaPredicted RBP6.33□□□□□ -1.4
ABCD4-220ENST00000553998 ELP2Q6IA86 826 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 C22orf42Q6IC83 251 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 LYPD2Q6UXB3 125 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 ACP7Q6ZNF0 438 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SLC36A1Q7Z2H8 476 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SATL1Q86VE3 508 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 TPRA1Q86W33 373 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 JAGN1Q8N5M9 183 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 BOLLQ8N9W6 283 aaKnown RBP6.33□□□□□ -1.4
ABCD4-220ENST00000553998 OR5D18Q8NGL1 313 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 CFHR4Q92496 578 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SLAMF9Q96A28 289 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 KCTD7Q96MP8 289 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 WDFY2Q96P53 400 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SPACA5Q96QH8 159 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 S100A13Q99584 98 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SIRPDQ9H106 197 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 METTL9Q9H1A3 318 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 WDR13Q9H1Z4 485 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 PPIL3Q9H2H8 161 aaKnown RBP6.33□□□□□ -1.4
ABCD4-220ENST00000553998 SMURF1Q9HCE7 757 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 EXOSC4Q9NPD3 245 aaKnown RBP6.33□□□□□ -1.4
ABCD4-220ENST00000553998 NECAP2Q9NVZ3 263 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 TXNL4BQ9NX01 149 aaKnown RBP6.33□□□□□ -1.4
ABCD4-220ENST00000553998 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
ABCD4-220ENST00000553998 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
ABCD4-220ENST00000553998 IGKV1-12A0A0C4DH73 117 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 A0A0U1RQK1 487 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 NKX6-3A6NJ46 265 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 OR2AT4A6NND4 320 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 RNASEK-C17orf49H0YIS7 233 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 SLC22A1O15245 554 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 SIGLEC5O15389 551 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ANGPTL7O43827 346 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 AIREO43918 545 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 TMEM127O75204 238 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 TOX4O94842 621 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ZNF205O95201 554 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 IGKV1D-12P01611 117 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 UBBP0CG47 229 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 VSIG8P0DPA2 414 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 PSG2P11465 335 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 GADD45AP24522 165 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 OR3A4PP47883 348 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 CAPZA1P52907 286 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ZNF146Q15072 292 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 DGUOKQ16854 277 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 NHLRC3Q5JS37 347 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 C11orf88Q6PI97 169 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ZNF788Q6ZQV5 615 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 RNF144BQ7Z419 303 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 GPR141Q7Z602 305 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 FAM58AQ8N1B3 248 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 PIP4P2Q8N4L2 257 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 OR6M1Q8NGM8 313 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ANGPTL6Q8NI99 470 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 EMG1Q92979 244 aaKnown RBP6.32□□□□□ -1.4
ABCD4-220ENST00000553998 RFT1Q96AA3 541 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 MRPS24Q96EL2 167 aaKnown RBP6.32□□□□□ -1.4
ABCD4-220ENST00000553998 SDSLQ96GA7 329 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 MED30Q96HR3 178 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ZNF488Q96MN9 340 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 FAM192AQ9GZU8 254 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 OR51E2Q9H255 320 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 CNTD2Q9H8S5 307 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 HMG20AQ9NP66 347 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
ABCD4-220ENST00000553998 GLS2Q9UI32 602 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 ZNF222Q9UK12 451 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 MRPS28Q9Y2Q9 187 aaKnown RBP6.32□□□□□ -1.4
ABCD4-220ENST00000553998 V9GY05 133 aa6.32□□□□□ -1.4
ABCD4-220ENST00000553998 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 LOC100506127A0A0U1RQW1 187 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 SHISA3A0PJX4 238 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 RFPL4AA6NLU0 287 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 RFPL4AL1F8VTS6 287 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 H3BUI4 141 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 SLC17A2O00624 439 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 ADAM20O43506 726 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 GABARAPO95166 117 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 GYPAP02724 150 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 CSTBP04080 98 aaKnown RBP6.31□□□□□ -1.4
ABCD4-220ENST00000553998 CHRM2P08172 466 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 GTF2F2P13984 249 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 PRKACAP17612 351 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 AMY2BP19961 511 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 RAB3BP20337 219 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 BCL3P20749 454 aa6.31□□□□□ -1.4
ABCD4-220ENST00000553998 HTR2CP28335 458 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms