RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 NDUFB3O43676 98 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 NDUFS7O75251 213 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 LY6HO94772 140 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 LPLP06858 475 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 MELTFP08582 738 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 RPS2P15880 293 aaKnown RBP12.12□□□□□ -0.47
SHMT2-210ENST00000553950 SLC25A16P16260 332 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 DUSP1P28562 367 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 PRSS3P35030 304 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 NPY4RP50391 375 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ACTBP60709 375 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ACTG1P63261 375 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 SSBP1Q04837 148 aaKnown RBP12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ARFRP1Q13795 201 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 SIGIRRQ6IA17 410 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 PRSS57Q6UWY2 283 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 OR8B3Q8NGG8 313 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ST8SIA4Q92187 359 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 NRGNQ92686 78 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 NEIL1Q96FI4 390 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-210ENST00000553950 GAFA1Q96PS6 74 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 OR8B2Q96RD0 313 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 CCDC32Q9BV29 185 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 CHST6Q9GZX3 395 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM165Q9HC07 324 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ETAA1Q9NY74 926 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
SHMT2-210ENST00000553950 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 DSCAML1Q8TD84 2053 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 TRAV24A0A0B4J272 114 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 A0A0G2JMP0 313 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 A0A0X1KG70 313 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 CEACAM18A8MTB9 384 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 K7N7A8 449 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 GNB3P16520 340 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 DTYMKP23919 212 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM50BP56557 158 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 GRK1Q15835 563 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 PYDC2Q56P42 97 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 PLAC9Q5JTB6 97 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 TRAT1Q6PIZ9 186 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 BIVMQ86UB2 503 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 IZUMO1Q8IYV9 350 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 MFSD4AQ8N468 514 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 C19orf18Q8NEA5 215 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 OR4M2Q8NGB6 313 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 SMIM4Q8WVI0 70 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 FCAMRQ8WWV6 532 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 SEH1LQ96EE3 360 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
SHMT2-210ENST00000553950 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 PPA2Q9H2U2 334 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 RAB9BQ9NP90 201 aa12.11□□□□□ -0.47
SHMT2-210ENST00000553950 DCHS2Q6V1P9 2916 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 TMEM30CPA0ZSE6 113 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 HSPB6O14558 160 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF737O75373 536 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF205O95201 554 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 TK1P04183 234 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
SHMT2-210ENST00000553950 OR3A1P47881 315 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 CEBPDP49716 269 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-210ENST00000553950 PPP5CP53041 499 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 AVPI1Q5T686 147 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 CCL13Q99616 98 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 SULT4A1Q9BR01 284 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 SRRQ9GZT4 340 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 NCOR1P1Q9H4R4 102 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 CHMP1AQ9HD42 196 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-210ENST00000553950 IFT46Q9NQC8 304 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 TAS2R8Q9NYW2 309 aa12.1□□□□□ -0.47
SHMT2-210ENST00000553950 SLC25A10Q9UBX3 287 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-210ENST00000553950 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
SHMT2-210ENST00000553950 TRBV23-1A0A0A0MS06 115 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 TRBV6-6A0A0A6YYG2 114 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 HLA-DQB1P01920 261 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 RCVRNP35243 200 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 INPP1P49441 399 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 AP3S2P59780 193 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms