RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 HTR1DP28221 377 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 SOX2P48431 317 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 RAB13P51153 203 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 DYNLT3P51808 116 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 ARHGDIBP52566 201 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 GTF2A1P52655 376 aaPredicted RBP14.31□□□□□ -0.12
FOXN3-204ENST00000553840 EFNB2P52799 333 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 ZP1P60852 638 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 SLC34A1Q06495 639 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 AESQ08117 197 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 SMN1Q16637 294 aaKnown RBP14.31□□□□□ -0.12
FOXN3-204ENST00000553840 KIAA2026Q5HYC2 2103 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 KRBOX4Q5JUW0 171 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 RNF144BQ7Z419 303 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 PACRGLQ8N7B6 248 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 PXT1Q8NFP0 134 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 ZNF596Q8TC21 504 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 CYGBQ8WWM9 190 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 CORO2AQ92828 525 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 NKX1-2Q9UD57 310 aaPredicted RBP14.31□□□□□ -0.12
FOXN3-204ENST00000553840 HILPDAQ9Y5L2 63 aa14.31□□□□□ -0.12
FOXN3-204ENST00000553840 SLC33A1O00400 549 aaPredicted RBP14.3□□□□□ -0.12
FOXN3-204ENST00000553840 PEX14O75381 377 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 CSF1P09603 554 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 PTGFRP43088 359 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 GLIPR1P48060 266 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 ETV1P50549 477 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 PPP3R1P63098 170 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 RSU1Q15404 277 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 ELP2Q6IA86 826 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 HEPN1Q6WQI6 88 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 ABHD12Q8N2K0 398 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 OR4D6Q8NGJ1 314 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 CNIH3Q8TBE1 160 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 TNFAIP8L1Q8WVP5 186 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 CREB3L1Q96BA8 519 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 FAM192AQ9GZU8 254 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 OR6C3Q9NZP0 311 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 SIGLEC9Q9Y336 463 aa14.3□□□□□ -0.12
FOXN3-204ENST00000553840 EXOSC1Q9Y3B2 195 aaKnown RBP14.3□□□□□ -0.12
FOXN3-204ENST00000553840 ODAMA1E959 279 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 A6NDX4 124 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 TOR1AO14656 332 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 RRP9O43818 475 aaKnown RBP14.29□□□□□ -0.12
FOXN3-204ENST00000553840 CDK2P24941 298 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 DEFA6Q01524 100 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 CDK5R1Q15078 307 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 ARSJQ5FYB0 599 aaPredicted RBP14.29□□□□□ -0.12
FOXN3-204ENST00000553840 Q6P435 159 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 DHRSXQ8N5I4 330 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 ZNF565Q8N9K5 539 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 TMEM106AQ96A25 262 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 TMEM80Q96HE8 168 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 NR1H4Q96RI1 486 aaPredicted RBP14.29□□□□□ -0.12
FOXN3-204ENST00000553840 S100A13Q99584 98 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 PRSS22Q9GZN4 317 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 BABAM2Q9NXR7 383 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 ING3Q9NXR8 418 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 TAS2R4Q9NYW5 299 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 DIMT1Q9UNQ2 313 aaKnown RBP14.29□□□□□ -0.12
FOXN3-204ENST00000553840 ZNF281Q9Y2X9 895 aa14.29□□□□□ -0.12
FOXN3-204ENST00000553840 ZNF729A6NN14 1252 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-204ENST00000553840 LEUTXA8MZ59 168 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 H0YJX3 145 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 GABRPO00591 440 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 CASQ2O14958 399 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-204ENST00000553840 CLIC3O95833 236 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 ALDOBP05062 364 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 VSIG10L2P0DP72 767 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 BRS3P32247 399 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 CEACAM3P40198 252 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 PRRX1P54821 245 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-204ENST00000553840 LDLRAD2Q5SZI1 272 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 OGFRL1Q5TC84 451 aaPredicted RBP14.28□□□□□ -0.12
FOXN3-204ENST00000553840 PRAMEF5Q5TYX0 476 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 OR2G6Q5TZ20 316 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 TMEM219Q86XT9 240 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 KLHDC1Q8N7A1 406 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 BARHL1Q9BZE3 327 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 DPM3Q9P2X0 92 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 HSPE1-MOB4S4R3N1 261 aa14.28□□□□□ -0.12
FOXN3-204ENST00000553840 MMP23AO75900 390 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 BDH1Q02338 343 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 IL13RA2Q14627 380 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 PAN3Q58A45 887 aaKnown RBP14.27□□□□□ -0.13
FOXN3-204ENST00000553840 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 OR51A2Q8NGJ7 313 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 OR51T1Q8NGJ9 327 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 OR4P4Q8NGL7 312 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 RGP1Q92546 391 aaPredicted RBP14.27□□□□□ -0.13
FOXN3-204ENST00000553840 SMIM19Q96E16 107 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 COQ2Q96H96 371 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 AKR1E2Q96JD6 320 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 TMEM138Q9NPI0 162 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
FOXN3-204ENST00000553840 FOXJ3Q9UPW0 622 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 TRRAPQ9Y4A5 3859 aa14.27□□□□□ -0.13
FOXN3-204ENST00000553840 HSPB6O14558 160 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms