RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 C1orf147Q96MC9 270 aaPredicted RBP11.44□□□□□ -0.58
TUBB3-202ENST00000553656 GFI1Q99684 422 aa11.44□□□□□ -0.58
TUBB3-202ENST00000553656 CENPOQ9BU64 300 aa11.44□□□□□ -0.58
TUBB3-202ENST00000553656 TMEM59Q9BXS4 323 aa11.44□□□□□ -0.58
TUBB3-202ENST00000553656 ZANQ9Y493 2812 aa11.44□□□□□ -0.58
TUBB3-202ENST00000553656 hCG_1809904A0A1W2PP81 198 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 A0A1W2PPE2 198 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 A0A1W2PR64 198 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 A0A1W2PRV1 198 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SHISA3A0PJX4 238 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SMIM30A4D0T7 59 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 NOTOA8MTQ0 251 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 AIPO00170 330 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 CRLF1O75462 422 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 TOX4O94842 621 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SRD5A1P18405 259 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SDC2P34741 201 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 KCNJ3P48549 501 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 CLDN12P56749 244 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 ARF6P62330 175 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 MXD1Q05195 221 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SCGB2A2Q13296 93 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 ATXN7L3Q14CW9 347 aaPredicted RBP11.43□□□□□ -0.58
TUBB3-202ENST00000553656 OR2W3Q7Z3T1 314 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 KIR3DL3Q8N743 410 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 TMEM104Q8NE00 496 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 FAM3DQ96BQ1 224 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 URM1Q9BTM9 101 aaKnown RBP11.43□□□□□ -0.58
TUBB3-202ENST00000553656 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 IFT22Q9H7X7 185 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 C19orf12Q9NSK7 152 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 SCOCQ9UIL1 159 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 KPTNQ9Y664 436 aa11.43□□□□□ -0.58
TUBB3-202ENST00000553656 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 TRAV24A0A0B4J272 114 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A18PA6NE21 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A16PA6NEW6 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A20PA6NIJ5 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A8PA6NJQ4 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A22PA8MWA6 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A12PA8MX19 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A5PA8MXJ8 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 CSN2P05814 226 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A15PP0C7V4 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A13PP0C7W8 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A14PP0C7W9 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM90A24PP0C7X0 464 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 P2RX3P56373 397 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 LSM3P62310 102 aaKnown RBP11.42□□□□□ -0.58
TUBB3-202ENST00000553656 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-202ENST00000553656 FAM189A2Q15884 450 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 KRBOX4Q5JUW0 171 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 OR10K2Q6IF99 312 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 TRAPPC6BQ86SZ2 158 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 SUMF2Q8NBJ7 301 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 OR51D1Q8NGF3 324 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 SLC25A28Q96A46 364 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 POM121Q96HA1 1249 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 Q96M66 194 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 DPCDQ9BVM2 203 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-202ENST00000553656 BARHL1Q9BZE3 327 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 ING3Q9NXR8 418 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 OPN4Q9UHM6 478 aa11.42□□□□□ -0.58
TUBB3-202ENST00000553656 TEP1Q99973 2627 aaKnown RBP11.41□□□□□ -0.58
TUBB3-202ENST00000553656 TMEM14DPA8MWL7 114 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 MCRIP1C9JLW8 97 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 M0R1W7 72 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 AVPP01185 164 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 CFPP27918 469 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 ERP29P30040 261 aaKnown RBP11.41□□□□□ -0.58
TUBB3-202ENST00000553656 ALDH3B2P48448 385 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 RPS27AP62979 156 aaKnown RBP11.41□□□□□ -0.58
TUBB3-202ENST00000553656 AESQ08117 197 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 RBM39Q14498 530 aaKnown RBP11.41□□□□□ -0.58
TUBB3-202ENST00000553656 C2orf76Q3KRA6 126 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 BPIFB2Q8N4F0 458 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 UPRTQ96BW1 309 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 NEDD4LQ96PU5 975 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 KCNK15Q9H427 330 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 LIN7BQ9HAP6 207 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 DAPK2Q9UIK4 370 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 PEX16Q9Y5Y5 336 aa11.41□□□□□ -0.58
TUBB3-202ENST00000553656 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 TRGV10A0A0A0MS01 117 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 TRAV40A0A0B4J280 105 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 TFAP2AP05549 437 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 FAM157CP0CG43 387 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 FUT3P21217 361 aa11.4□□□□□ -0.58
TUBB3-202ENST00000553656 RPL5P46777 297 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms