RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 MAFIPQ8WZ33 124 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 NAT6Q93015 286 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM45BQ96B21 275 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SGK3Q96BR1 496 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 FBXO17Q96EF6 278 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 BORCS8Q96FH0 119 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 LIN37Q96GY3 246 aaPredicted RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 REEP6Q96HR9 211 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 GNRHR2Q96P88 292 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 PAPOLGQ9BWT3 736 aaKnown RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TPSD1Q9BZJ3 242 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 EIF5A2Q9GZV4 153 aaKnown RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 LIME1Q9H400 295 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 RIMS4Q9H426 269 aaPredicted RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 OPA3Q9H6K4 179 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 GSN-AS1Q9NRJ2 163 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM38BQ9NVV0 291 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC7A11Q9UPY5 501 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 MRPS18CQ9Y3D5 142 aaKnown RBP4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 MMP24Q9Y5R2 645 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 CACNA1CQ13936 2221 aa4.54□□□□□ -1.68
TMEM55B-204ENST00000553602 TDRD6O60522 2096 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IGKV1-27A0A075B6S5 117 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IGHV1-45A0A0A0MS14 117 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IGKV1-12A0A0C4DH73 117 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 C3orf85A0A1B0GTC6 90 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 OR5H15A6NDH6 313 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 RBFOX3A6NFN3 312 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF729A6NN14 1252 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF716A6NP11 495 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 LINC00587B1AMM8 73 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 H0Y980 276 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 HSD17B6O14756 317 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 AGPAT2O15120 278 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PHF1O43189 567 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZIC3O60481 467 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 CLN5O75503 358 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 CBR3O75828 277 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 OR2C1O95371 312 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 NAPSAO96009 420 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 NRASP01111 189 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IGKV1D-12P01611 117 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PRH1P02810 166 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SNRNP70P08621 437 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SRP19P09132 144 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 COX5BP10606 129 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 VDAC1P21796 283 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 AADACP22760 399 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 EPHA8P29322 1005 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SRD5A2P31213 254 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PPP1CCP36873 323 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TAGLN2P37802 199 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 HTR5AP47898 357 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 CDX1P47902 265 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ID4P47928 161 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 NPBWR2P48146 333 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 RND2P52198 227 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 CCL7P80098 99 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TLE4Q04727 773 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IL24Q13007 206 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TRA2AQ13595 282 aaKnown RBP eCLIP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TAF9Q16594 264 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PHYHD1Q5SRE7 291 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SPSB3Q6PJ21 355 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC22A25Q6T423 547 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF574Q6ZN55 896 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SHISA6Q6ZSJ9 500 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 DPPA2Q7Z7J5 298 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PPP1R3BQ86XI6 285 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 DTX1Q86Y01 620 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZFP82Q8N141 532 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SPEM1Q8N4L4 309 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM252Q8N6L7 170 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 LINC00469Q8N7U9 141 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF565Q8N9K5 539 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 FAM213BQ8TBF2 198 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 NPRL2Q8WTW4 380 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 TOMM40LQ969M1 308 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SGCZQ96LD1 299 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IMMP1LQ96LU5 166 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 CCDC74BQ96LY2 380 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IP6K3Q96PC2 410 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF385AQ96PM9 386 aaKnown RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 OR6C1Q96RD1 312 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 RAB40CQ96S21 281 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ATP5SQ99766 215 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 HDHD3Q9BSH5 251 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PSMG3Q9BT73 122 aaPredicted RBP4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 IER2Q9BTL4 223 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 FAAP24Q9BTP7 215 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 C1QTNF5Q9BXJ0 243 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SMIM3Q9BZL3 60 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 LINC00470Q9BZP3 86 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 SH3BGRL3Q9H299 93 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 PLK3Q9H4B4 646 aa4.53□□□□□ -1.68
TMEM55B-204ENST00000553602 ELL3Q9HB65 397 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms