RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 DMRTB1Q96MA1 342 aa16.07■□□□□ 0.16
PSEN1-207ENST00000553599 DPCDQ9BVM2 203 aaPredicted RBP16.07■□□□□ 0.16
PSEN1-207ENST00000553599 SLIRPQ9GZT3 109 aaKnown RBP16.07■□□□□ 0.16
PSEN1-207ENST00000553599 SHARPINQ9H0F6 387 aa16.07■□□□□ 0.16
PSEN1-207ENST00000553599 COMMD3Q9UBI1 195 aa16.07■□□□□ 0.16
PSEN1-207ENST00000553599 METRNQ9UJH8 293 aa16.07■□□□□ 0.16
PSEN1-207ENST00000553599 HSF4Q9ULV5 492 aa16.07■□□□□ 0.16
PSEN1-207ENST00000553599 POLR3KQ9Y2Y1 108 aaPredicted RBP16.07■□□□□ 0.16
PSEN1-207ENST00000553599 TEX15Q9BXT5 2789 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 MCRIP1C9JLW8 97 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 PSPNO60542 156 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 APOA1P02647 267 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 TFF1P04155 84 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 CHATP28329 748 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 ERP29P30040 261 aaKnown RBP16.06■□□□□ 0.16
PSEN1-207ENST00000553599 BLVRBP30043 206 aaPredicted RBP16.06■□□□□ 0.16
PSEN1-207ENST00000553599 OR3A1P47881 315 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 VEGFCP49767 419 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 GRK1Q15835 563 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 SIGIRRQ6IA17 410 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 SUMF2Q8NBJ7 301 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 SLC25A38Q96DW6 304 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 S100A16Q96FQ6 103 aaKnown RBP16.06■□□□□ 0.16
PSEN1-207ENST00000553599 NICN1Q9BSH3 213 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 NXF2Q9GZY0 626 aaKnown RBP16.06■□□□□ 0.16
PSEN1-207ENST00000553599 ATG5Q9H1Y0 275 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 PEX16Q9Y5Y5 336 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 OTOGQ6ZRI0 2925 aa16.06■□□□□ 0.16
PSEN1-207ENST00000553599 TRBV23-1A0A0A0MS06 115 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 A0A0A6YYD4 124 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 A0A1B0GW55 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 FOXI3A8MTJ6 420 aaPredicted RBP16.05■□□□□ 0.16
PSEN1-207ENST00000553599 B4DSR2 109 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 H7C1Q1 480 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 CA11O75493 328 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L2P0CJ85 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L3P0CJ86 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L4P0CJ87 422 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L5P0CJ88 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L6P0CJ89 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L7P0CJ90 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 NDUFB7P17568 137 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 IL2RGP31785 369 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 GZMKP49863 264 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 PLA2G7Q13093 441 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 PDCD1Q15116 288 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4L9Q6RFH8 374 aaPredicted RBP16.05■□□□□ 0.16
PSEN1-207ENST00000553599 GDPD3Q7L5L3 318 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 OR10R2Q8NGX6 335 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 ST8SIA4Q92187 359 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 COX4I2Q96KJ9 171 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DCUN1D5Q9BTE7 237 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 MMP27Q9H306 513 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 NCOR1P1Q9H4R4 102 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DIABLOQ9NR28 239 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 DUX4Q9UBX2 424 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 LPAR3Q9UBY5 353 aa16.05■□□□□ 0.16
PSEN1-207ENST00000553599 PPIAL4CA0A0B4J2A2 164 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 RAB27BO00194 218 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 SELLP14151 372 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 SEC61A1P61619 476 aaKnown RBP16.04■□□□□ 0.16
PSEN1-207ENST00000553599 TMEM249Q2WGJ8 235 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 Q6ZTK2 550 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 LINC01356Q8N9X3 169 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 OR4S1Q8NGB4 309 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 MCFD2Q8NI22 146 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 RAB3CQ96E17 227 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 PPA2Q9H2U2 334 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 PLEKHJ1Q9NW61 149 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 ADAM30Q9UKF2 790 aa16.04■□□□□ 0.16
PSEN1-207ENST00000553599 CYSRT1A8MQ03 144 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 KIAA1324LA8MWY0 1029 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-207ENST00000553599 FAM157AC9JC47 383 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 SOCS1O15524 211 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 TMEM50BP56557 158 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 MEF2CQ06413 473 aaPredicted RBP16.03■□□□□ 0.16
PSEN1-207ENST00000553599 CMTM4Q8IZR5 234 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 C8orf46Q8TAG6 207 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 DCTN5Q9BTE1 182 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 CHST6Q9GZX3 395 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 VPS13CQ709C8 3753 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 AKAP9Q99996 3911 aa16.03■□□□□ 0.16
PSEN1-207ENST00000553599 LOC105371242A0A075B767 164 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 POM121CA8CG34 1229 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 SERPINE3A8MV23 424 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 FCN3O75636 299 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 MSMBP08118 114 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 FOSL1P15407 271 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 NKAPLQ5M9Q1 402 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 BTN2A1Q7KYR7 527 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 BIVMQ86UB2 503 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 NEK7Q8TDX7 302 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 C18orf12Q96KH6 178 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.02■□□□□ 0.16
PSEN1-207ENST00000553599 ZNF581Q9P0T4 197 aa16.02■□□□□ 0.16
PSEN1-207ENST00000553599 TRAV20A0A0B4J274 112 aa16.01■□□□□ 0.15
PSEN1-207ENST00000553599 RGS5O15539 181 aa16.01■□□□□ 0.15
PSEN1-207ENST00000553599 PHF1O43189 567 aaPredicted RBP16.01■□□□□ 0.15
PSEN1-207ENST00000553599 XRCC3O43542 346 aa16.01■□□□□ 0.15
PSEN1-207ENST00000553599 ENSAO43768 121 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms