RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 TMEM11P17152 192 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 CRISP1P54107 249 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 HES1Q14469 280 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 C9orf66Q5T8R8 295 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 SLC35E3Q7Z769 313 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 DNAAF1Q8NEP3 725 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 MUC7Q8TAX7 377 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 CANT1Q8WVQ1 401 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 ADI1Q9BV57 179 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 HMG20AQ9NP66 347 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
RAB5C-209ENST00000552162 FGF16O43320 207 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 NFYBP25208 207 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 ECI1P42126 302 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 MTCP1P56278 107 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 STPG2Q8N412 459 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 DRAM1Q8N682 238 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 OR8U1Q8NH10 309 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 OR9G1Q8NH87 305 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 PP6455Q8WZ26 134 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 C10orf35Q96D05 121 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 COQ2Q96H96 371 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 TBX5Q99593 518 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 PRRG3Q9BZD7 231 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 H2AFY2Q9P0M6 372 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-209ENST00000552162 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
RAB5C-209ENST00000552162 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-209ENST00000552162 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
RAB5C-209ENST00000552162 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
RAB5C-209ENST00000552162 IGKV1-9A0A0C4DH69 117 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 LOC107986453A0A1B0GWG9 222 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 ZNF729A6NN14 1252 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-209ENST00000552162 IGHG2P01859 326 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 CSN2P05814 226 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 ZNF44P15621 663 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 HNF4GQ14541 408 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
RAB5C-209ENST00000552162 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 NXNL2Q5VZ03 156 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 COMMD4Q9H0A8 199 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
RAB5C-209ENST00000552162 IGKV1-12A0A0C4DH73 117 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 IGKV1D-12P01611 117 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
RAB5C-209ENST00000552162 CHATP28329 748 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 SCN1BQ07699 218 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 PDZK1IP1Q13113 114 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 ATXN7L3Q14CW9 347 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-209ENST00000552162 AADACL4Q5VUY2 407 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 TEX38Q6PEX7 206 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 LHFPL2Q6ZUX7 228 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 TCEANCQ8N8B7 351 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 Q8NFD4 153 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
RAB5C-209ENST00000552162 ADAT3Q96EY9 351 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-209ENST00000552162 PPIL3Q9H2H8 161 aaKnown RBP12.83□□□□□ -0.36
RAB5C-209ENST00000552162 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 SEC14L6B5MCN3 397 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 J3QR06 171 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 UBCP0CG48 685 aaKnown RBP12.82□□□□□ -0.36
RAB5C-209ENST00000552162 ATF1P18846 271 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 PRKACBP22694 351 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 BNIP1Q12981 228 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 MADCAM1Q13477 382 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 DIAPH2-AS1Q14236 149 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 RDH10Q8IZV5 341 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 TMEM163Q8TC26 289 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 HRASLS5Q96KN8 279 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 OR6C3Q9NZP0 311 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 SCOCQ9UIL1 159 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
RAB5C-209ENST00000552162 BIRC6Q9NR09 4857 aa12.82□□□□□ -0.36
RAB5C-209ENST00000552162 A0A1W2PQL4 384 aaPredicted RBP12.81□□□□□ -0.36
RAB5C-209ENST00000552162 AQP12BA6NM10 295 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 AP4M1O00189 453 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
RAB5C-209ENST00000552162 KDM4BO94953 1096 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
RAB5C-209ENST00000552162 GLP1RP43220 463 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 RAB7AP51149 207 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 EFNB1P98172 346 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
RAB5C-209ENST00000552162 CXorf66Q5JRM2 361 aaPredicted RBP12.81□□□□□ -0.36
RAB5C-209ENST00000552162 Q6P435 159 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms