RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 YTHDF1Q9BYJ9 559 aaKnown RBP3.75□□□□□ -1.81
CPSF6-206ENST00000550987 UGT1A7Q9HAW7 530 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 UGT1A8Q9HAW9 530 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 EML4Q9HC35 981 aaKnown RBP3.75□□□□□ -1.81
CPSF6-206ENST00000550987 VCX3AQ9NNX9 186 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 SLCO1B3Q9NPD5 702 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 CTPS2Q9NRF8 586 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 C19orf12Q9NSK7 152 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 IMP3Q9NV31 184 aaKnown RBP3.75□□□□□ -1.81
CPSF6-206ENST00000550987 SLC25A37Q9NYZ2 338 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 STMN3Q9NZ72 180 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 ZNF282Q9UDV7 671 aaPredicted RBP3.75□□□□□ -1.81
CPSF6-206ENST00000550987 STOML2Q9UJZ1 356 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 POFUT2Q9Y2G5 429 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 URGCP-MRPS24S4R325 110 aa3.75□□□□□ -1.81
CPSF6-206ENST00000550987 INTS1Q8N201 2190 aaKnown RBP3.75□□□□□ -1.81
CPSF6-206ENST00000550987 RAI1Q7Z5J4 1906 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 SRP72O76094 671 aaKnown RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 VAPBO95292 243 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 ETHE1O95571 254 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 RPS17P08708 135 aaKnown RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 OR4E1P0C645 316 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 M6PRP20645 277 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 BGNP21810 368 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 HSD11B1P28845 292 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 OR1E1P30953 314 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 GPR1P46091 355 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 VSX2P58304 361 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 ATP6V0D1P61421 351 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 CYP24A1Q07973 514 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 YIF1BQ5BJH7 314 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 GPR107Q5VW38 600 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 KHDRBS2Q5VWX1 349 aaKnown RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 ANKRD22Q5VYY1 191 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 TMPRSS11AQ6ZMR5 421 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 RTL4Q6ZR62 310 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 ZNF720Q7Z2F6 126 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 TAC4Q86UU9 113 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 SLC51BQ86UW2 128 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 GID4Q8IVV7 300 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 ENTHD1Q8IYW4 607 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 C11orf42Q8N5U0 333 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 CYB561A3Q8NBI2 242 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 OR5B17Q8NGF7 314 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 OR2A1Q8NGT9 310 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 APH1AQ96BI3 265 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 S100PBPQ96BU1 408 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 AURKBQ96GD4 344 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-206ENST00000550987 CIB1Q99828 191 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 MICU1Q9BPX6 476 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 BTRCQ9Y297 605 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 LRRC42Q9Y546 428 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 KPTNQ9Y664 436 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 MYH11P35749 1972 aa3.74□□□□□ -1.81
CPSF6-206ENST00000550987 PHF3Q92576 2039 aaKnown RBP3.73□□□□□ -1.81
CPSF6-206ENST00000550987 FABP12A6NFH5 140 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 CENPXA8MT69 81 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 KLRC4-KLRK1H3BQV0 150 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 PEX7O00628 323 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 RFXANKO14593 260 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 NPIPB7O75200 414 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 C6orf47O95873 294 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 INSP01308 110 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 ARG1P05089 322 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 FABP1P07148 127 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 CD3GP09693 182 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 MAGP20916 626 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 F2RP25116 425 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 HRH1P35367 487 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 MAS1LP35410 378 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 TDGF1P3P51864 188 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 FGF8P55075 233 aaPredicted RBP3.73□□□□□ -1.81
CPSF6-206ENST00000550987 LYZP61626 148 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 OR7A5Q15622 319 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 CST6Q15828 149 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 GUCA2BQ16661 112 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 C5orf64Q2M2E5 130 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 C9orf64Q5T6V5 341 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 FBXL22Q6P050 247 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 GUSBP11Q6P575 273 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 ABHD13Q7L211 337 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 SMIM15Q7Z3B0 74 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 ZNF547Q8IVP9 402 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 KIF2BQ8N4N8 673 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 OR6X1Q8NH79 312 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 LINC01006Q8NI28 216 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 RNF133Q8WVZ7 376 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 PHYHIPLQ96FC7 376 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 ANKRD36BP1Q96IX9 119 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 IMMP1LQ96LU5 166 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 TSSK3Q96PN8 268 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 DCUN1D5Q9BTE7 237 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 OR2AG1Q9H205 316 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 OR51B6Q9H340 312 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 ZNF629Q9UEG4 869 aaPredicted RBP3.73□□□□□ -1.81
CPSF6-206ENST00000550987 C3orf18Q9UK00 162 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms