RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZFPL1O95159 310 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 GBX2P52951 348 aaPredicted RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 NCS1P62166 190 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 LSM3P62310 102 aaKnown RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 ZNF273Q14593 569 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 PLA1AQ53H76 456 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 ACP7Q6ZNF0 438 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 SHFQ7M4L6 423 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 CROCCP3Q8IVE0 287 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 TIGD4Q8IY51 512 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 OR13D1Q8NGV5 346 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 NDNFQ8TB73 568 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 AQP3Q92482 292 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 PIGCQ92535 297 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 ZNF649Q9BS31 505 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 ABHD6Q9BV23 337 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 OR51E2Q9H255 320 aa10.82□□□□□ -0.68
CDX2-202ENST00000548877 EXOSC4Q9NPD3 245 aaKnown RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 ZMAT5Q9UDW3 170 aaKnown RBP10.82□□□□□ -0.68
CDX2-202ENST00000548877 TRDV1A0A1B0GX56 115 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 RFPL4AA6NLU0 287 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 RFPL4AL1F8VTS6 287 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 NOS1APO75052 506 aaPredicted RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 ARG1P05089 322 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 CD1AP06126 327 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 FGF9P31371 208 aaPredicted RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 GPM6AP51674 278 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 CAPZA1P52907 286 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 EIF2B1Q14232 305 aaKnown RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 CEACAM21Q3KPI0 293 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 CCDC58Q4VC31 144 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 MINOS1Q5TGZ0 78 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 ZNF782Q6ZMW2 699 aaPredicted RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 PLEKHG7Q6ZR37 379 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 RNF144BQ7Z419 303 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 MRPL41Q8IXM3 137 aaKnown RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 POC1AQ8NBT0 407 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 OR5A2Q8NGI9 324 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 PGAM5Q96HS1 289 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 LYZL4Q96KX0 146 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 KCTD7Q96MP8 289 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 HIST1H2AAQ96QV6 131 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 MCRIP2Q9BUT9 160 aaKnown RBP10.81□□□□□ -0.68
CDX2-202ENST00000548877 PLGRKTQ9HBL7 147 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 HMG20AQ9NP66 347 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 MINOS1-NBL1R4GNA1 71 aa10.81□□□□□ -0.68
CDX2-202ENST00000548877 A0A1W2PQL4 384 aaPredicted RBP10.8□□□□□ -0.68
CDX2-202ENST00000548877 OR5B21A6NL26 309 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 ZNF732B4DXR9 585 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 H3BUI4 141 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 GPX5O75715 221 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 SERPINA3P01011 423 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 IL1AP01583 271 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 GYPBP06028 91 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 MRPL3P09001 348 aaKnown RBP10.8□□□□□ -0.68
CDX2-202ENST00000548877 CLUP10909 449 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 PRDX2P32119 198 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 GFOD2Q3B7J2 385 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 SMIM21Q3B7S5 101 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 NKAPLQ5M9Q1 402 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 CD200R1LQ6Q8B3 271 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 FAM220AQ7Z4H9 259 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 OR4M1Q8NGD0 313 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 OR4X2Q8NGF9 303 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 ASB17Q8WXJ9 295 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 AMELYQ99218 206 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
CDX2-202ENST00000548877 LIN7BQ9HAP6 207 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 PALMDQ9NP74 551 aa10.8□□□□□ -0.68
CDX2-202ENST00000548877 LSM4Q9Y4Z0 139 aaKnown RBP10.8□□□□□ -0.68
CDX2-202ENST00000548877 DNAH1Q9P2D7 4330 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 J3QLW9 94 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 SULT1C4O75897 302 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 TK1P04183 234 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF728P0DKX0 622 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF19P17023 458 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 CELP19835 753 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 S100A5P33763 92 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 RORCP51449 518 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 OR12D2P58182 307 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF85Q03923 595 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF846Q147U1 533 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
CDX2-202ENST00000548877 ZNF454Q8N9F8 522 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 MCFD2Q8NI22 146 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 AP3S1Q92572 193 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 BORCS5Q969J3 196 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 C4orf36Q96KX1 117 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 OR8B4Q96RC9 309 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 INTS14Q96SY0 518 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 TBX5Q99593 518 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 CENPOQ9BU64 300 aa10.79□□□□□ -0.68
CDX2-202ENST00000548877 PEX16Q9Y5Y5 336 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms