RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PLEKHA1Q9HB21 404 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF286AQ9HBT8 521 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 CYB5R1Q9UHQ9 305 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 PSME2Q9UL46 239 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 V9GYY9 64 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 KMT2BQ9UMN6 2715 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-206ENST00000548771 TRBV24-1A0A075B6N3 115 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 RBFOX3A6NFN3 312 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 TVP23AA6NH52 213 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 F5H5T6 163 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 KLRC4-KLRK1H3BQV0 150 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 TP53I11O14683 189 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 MBP02144 154 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 GABRA1P14867 456 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 SRMP19623 302 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 M6PRP20645 277 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 PYCR3Q53H96 274 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 PCOTHQ58A44 107 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 LAIR2Q6ISS4 152 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 OR5C1Q8NGR4 320 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 OR51Q1Q8NH59 317 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 OR2V1Q8NHB1 315 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 DOK4Q8TEW6 326 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 MAL2Q969L2 176 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 ADTRPQ96IZ2 230 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 LINC01587Q99440 93 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 VAT1Q99536 393 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 UTP23Q9BRU9 249 aaKnown RBP1.03□□□□□ -2.24
CCDC38-206ENST00000548771 CHID1Q9BWS9 393 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 SLC25A31Q9H0C2 315 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 OR2D2Q9H210 308 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 PRORYQ9H606 182 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 AQRO60306 1485 aaKnown RBP eCLIP1.03□□□□□ -2.24
CCDC38-206ENST00000548771 NEURL4Q96JN8 1562 aa1.03□□□□□ -2.24
CCDC38-206ENST00000548771 IGHV1-45A0A0A0MS14 117 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 A0A1W2PPV4 95 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 OR5H14A6NHG9 310 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 H3BP45 60 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 EEF1E1O43324 174 aaKnown RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 ENSAO43768 121 aaKnown RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 SH2D1AO60880 128 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 OR12D1P0DN82 309 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 PRKACAP17612 351 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 CNTFRP26992 372 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 CASP8Q14790 479 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 CEACAM16Q2WEN9 425 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 TMEM176BQ3YBM2 270 aaPredicted RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 GLYATQ6IB77 296 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 NIPAL1Q6NVV3 410 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 TPGS1Q6ZTW0 290 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 TCF23Q7RTU1 214 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 C10orf107Q8IVU9 208 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 GAPTQ8N292 157 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 FAM184AQ8NB25 1140 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 DRAXINQ8NBI3 349 aaPredicted RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 CLHC1Q8NHS4 586 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 BLNKQ8WV28 456 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 CCL17Q92583 94 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 NRCAMQ92823 1304 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 APOL4Q9BPW4 351 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 TSSK6Q9BXA6 273 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 MFSD1Q9H3U5 465 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 POMKQ9H5K3 350 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 ACOT13Q9NPJ3 140 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 RPRD1BQ9NQG5 326 aaKnown RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 KCNIP2Q9NS61 270 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 DDX18Q9NVP1 670 aaKnown RBP1.02□□□□□ -2.25
CCDC38-206ENST00000548771 SDHAF2Q9NX18 166 aa1.02□□□□□ -2.25
CCDC38-206ENST00000548771 LAMB2P55268 1798 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 NOS1P29475 1434 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 GOLGA6L7A0A1B0GV03 622 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 K7EN84 100 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 M0QXV9 152 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 PRMT5O14744 637 aaPredicted RBP1.01□□□□□ -2.25
CCDC38-206ENST00000548771 SPOPO43791 374 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 ZNF140P52738 457 aaPredicted RBP1.01□□□□□ -2.25
CCDC38-206ENST00000548771 STX4Q12846 297 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 FOXF1Q12946 379 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 STK38Q15208 465 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 GOLGA7BQ2TAP0 167 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 CEACAM21Q3KPI0 293 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 SPIN4Q56A73 249 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 RESP18Q5W5W9 173 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 ASCL4Q6XD76 172 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 MARCH3Q86UD3 253 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 DNAAF3Q8N9W5 541 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 FER1L6-AS1Q8NA97 138 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 OR4A15Q8NGL6 344 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 HIST1H2BAQ96A08 127 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 OLFM3Q96PB7 478 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 NXF2Q9GZY0 626 aaKnown RBP1.01□□□□□ -2.25
CCDC38-206ENST00000548771 ARL6Q9H0F7 186 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 FBXO44Q9H4M3 255 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 NCOR1P1Q9H4R4 102 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 ANKHQ9HCJ1 492 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 TAS2R9Q9NYW1 312 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 SLC23A2Q9UGH3 650 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 URGCP-MRPS24S4R325 110 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 HSPE1-MOB4S4R3N1 261 aa1.01□□□□□ -2.25
CCDC38-206ENST00000548771 MYO9BQ13459 2157 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms