RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
SSH1-208ENST00000548522 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
SSH1-208ENST00000548522 WDR12Q9GZL7 423 aaKnown RBP13.2□□□□□ -0.3
SSH1-208ENST00000548522 NXF2Q9GZY0 626 aaKnown RBP13.2□□□□□ -0.3
SSH1-208ENST00000548522 NDUFB11Q9NX14 153 aa13.2□□□□□ -0.3
SSH1-208ENST00000548522 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 K7N7A8 449 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 MAGEB4O15481 346 aaPredicted RBP13.19□□□□□ -0.3
SSH1-208ENST00000548522 ZNF737O75373 536 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 DHRS3O75911 302 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 TTRP02766 147 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 ZNF728P0DKX0 622 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 IGHV1-8P0DP01 117 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 PF4V1P10720 104 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 GALP22466 123 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 EDDM3BP56851 147 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 TPBGQ13641 420 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 MED22Q15528 200 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 EGFL6Q8IUX8 553 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 HMG20AQ9NP66 347 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
SSH1-208ENST00000548522 NUFIP1Q9UHK0 495 aaKnown RBP13.19□□□□□ -0.3
SSH1-208ENST00000548522 PITPNC1Q9UKF7 332 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 SLC22A13Q9Y226 551 aa13.19□□□□□ -0.3
SSH1-208ENST00000548522 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 J3QRE1 110 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
SSH1-208ENST00000548522 CPEP16870 476 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 GADD45AP24522 165 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 CD24P25063 80 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 MPZP25189 248 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 PSMA1P25786 263 aaKnown RBP13.18□□□□□ -0.3
SSH1-208ENST00000548522 DYNLT3P51808 116 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 GPR50Q13585 617 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 EDDM3AQ14507 147 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 SLC35D3Q5M8T2 416 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 TPRX1Q8N7U7 411 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 SLIRPQ9GZT3 109 aaKnown RBP13.18□□□□□ -0.3
SSH1-208ENST00000548522 DCSTAMPQ9H295 470 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSH1-208ENST00000548522 GTF2A1LQ9UNN4 478 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
SSH1-208ENST00000548522 TMEM82A0PJX8 343 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 SH2D7A6NKC9 451 aaPredicted RBP13.17□□□□□ -0.3
SSH1-208ENST00000548522 HOXD3P31249 432 aaPredicted RBP13.17□□□□□ -0.3
SSH1-208ENST00000548522 VBP1P61758 197 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 NCS1P62166 190 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 ACTA2P62736 377 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 ACTG2P63267 376 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 ACTC1P68032 377 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 ACTA1P68133 377 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 ROM1Q03395 351 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 SSX1Q16384 188 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
SSH1-208ENST00000548522 BAIAP2L2Q6UXY1 529 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 MEPCEQ7L2J0 689 aaKnown RBP13.17□□□□□ -0.3
SSH1-208ENST00000548522 ZNF485Q8NCK3 441 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 NDNFQ8TB73 568 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
SSH1-208ENST00000548522 MROQ9BYG7 248 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 IL36RNQ9UBH0 155 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 IKZF2Q9UKS7 526 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 STUB1Q9UNE7 303 aa13.17□□□□□ -0.3
SSH1-208ENST00000548522 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 FAM90A22PA8MWA6 464 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 H3BSH0 61 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 MMP23AO75900 390 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 RBP4P02753 201 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 PF4P02776 101 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
SSH1-208ENST00000548522 OR12D2P58182 307 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 DEGS2Q6QHC5 323 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 ZNF679Q8IYX0 411 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 OR14K1Q8NGZ2 314 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 ZNF714Q96N38 554 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 AKIP1Q9NQ31 210 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 V9GYS6 101 aa13.16□□□□□ -0.3
SSH1-208ENST00000548522 IGKV1-27A0A075B6S5 117 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 TCRBV4S1A1TA0A5B7 111 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 ALDOBP05062 364 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 SOX6P35712 828 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 ETV1P50549 477 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
SSH1-208ENST00000548522 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
SSH1-208ENST00000548522 GDPD3Q7L5L3 318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms