RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 LHX4Q969G2 390 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 ELL3Q9HB65 397 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-217ENST00000548420 NEK6Q9HC98 313 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 HMG20AQ9NP66 347 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 TRBV5-5A0A0J9YX44 114 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 GPX5O75715 221 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 ALDOBP05062 364 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 CD1AP06126 327 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 BCL3P20749 454 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 MYF6P23409 242 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 LMO1P25800 156 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 POU3F4P49335 361 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 RIPK1Q13546 671 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 KISS1Q15726 138 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 TMEM200BQ69YZ2 307 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 Q8NFD4 153 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 GHSRQ92847 366 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 SNX22Q96L94 193 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 METTL8Q9H825 291 aaKnown RBP11.28□□□□□ -0.6
PTCH1-217ENST00000548420 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
PTCH1-217ENST00000548420 ONECUT1Q9UBC0 465 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
PTCH1-217ENST00000548420 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
PTCH1-217ENST00000548420 TMEM82A0PJX8 343 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 INMTO95050 263 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 CYB5AP00167 134 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 CDK1P06493 297 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 CD2P06729 351 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 SOX2P48431 317 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 WNT4P56705 351 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 TAS2R43P59537 309 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 RPL31P62899 125 aaKnown RBP11.27□□□□□ -0.61
PTCH1-217ENST00000548420 ACSM1Q08AH1 577 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 SPIN3Q5JUX0 258 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 STX19Q8N4C7 294 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 OR51A2Q8NGJ7 313 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 OR5D13Q8NGL4 314 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-217ENST00000548420 TSEN15Q8WW01 171 aaKnown RBP11.27□□□□□ -0.61
PTCH1-217ENST00000548420 EMG1Q92979 244 aaKnown RBP11.27□□□□□ -0.61
PTCH1-217ENST00000548420 TMEM106AQ96A25 262 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 RFT1Q96AA3 541 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 ANKRD60Q9BZ19 345 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 ZNRD1Q9P1U0 126 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 IL36RNQ9UBH0 155 aa11.27□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 PSPNO60542 156 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 HAND1O96004 215 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 OCM2P0CE71 109 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 OCMP0CE72 109 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-217ENST00000548420 IGFBP3P17936 291 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-217ENST00000548420 RAB3AP20336 220 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 UBE2E1P51965 193 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 CAPZA1P52907 286 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 DLX6P56179 175 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 SLC35A2P78381 396 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 BDH1Q02338 343 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 YIF1BQ5BJH7 314 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 ELP2Q6IA86 826 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 HCP5Q6MZN7 132 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 OR8H2Q8N162 312 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 PXT1Q8NFP0 134 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 OR52N4Q8NGI2 321 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
PTCH1-217ENST00000548420 VCX3BQ9H321 246 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 DUSP21Q9H596 190 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 PAK1IP1Q9NWT1 392 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-217ENST00000548420 TAS2R4Q9NYW5 299 aa11.26□□□□□ -0.61
PTCH1-217ENST00000548420 TRBV5-7A0A0A0MS05 114 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 HCKP08631 526 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 PRKACAP17612 351 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 DUSP1P28562 367 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 DLX1P56177 255 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 BLMHQ13867 455 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 IRF3Q14653 427 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 Q499Y3 187 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 TCTEX1D4Q5JR98 221 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 Q6P435 159 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 ZFP41Q8N8Y5 198 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
PTCH1-217ENST00000548420 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 OR5D18Q8NGL1 313 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 TMEM138Q9NPI0 162 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms