RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 C19orf25Q9UFG5 118 aaPredicted RBP4.35□□□□□ -1.71
TGFBR1-205ENST00000548365 POLR1DQ9Y2S0 133 aa4.35□□□□□ -1.71
TGFBR1-205ENST00000548365 LHFPL6Q9Y693 200 aa4.35□□□□□ -1.71
TGFBR1-205ENST00000548365 TMEM56-RWDD3S4R434 201 aa4.35□□□□□ -1.71
TGFBR1-205ENST00000548365 DNAH12Q6ZR08 3092 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 TRBV6-6A0A0A6YYG2 114 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 KIR2DS1A0A191URI9 304 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ZNF587BE7ETH6 402 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 LMO7DNF2Z398 122 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 TSTD3H0UI37 97 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 SOCS1O15524 211 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 DUX1O43812 170 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PTBP3O95758 552 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 IFNA1P01562 189 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OPN1MWP04001 364 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 HPNP05981 417 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OR5AC1P0C628 307 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ZNF728P0DKX0 622 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OPN1MW2P0DN77 364 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OPN1MW3P0DN78 364 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 BMP5P22003 454 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 GATA3P23771 443 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 S100GP29377 79 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 BLVRBP30043 206 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 CD200P41217 278 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RPS27P42677 84 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 KIR2DS4P43632 304 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 NPY4RP50391 375 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PPT1P50897 306 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 FBXW4P57775 412 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 TAS2R30P59541 319 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 S100A10P60903 97 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RPS23P62266 143 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 CCL7P80098 99 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MRPS34P82930 218 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 SERF2P84101 59 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 KCNAB1Q14722 419 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 KIR2DS1Q14954 304 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RAB35Q15286 201 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MSMO1Q15800 293 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 NNATQ16517 81 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ODF4Q2M2E3 257 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MPV17LQ2QL34 196 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 DEFB110Q30KQ9 67 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PLPPR5Q32ZL2 321 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 C14orf28Q4W4Y0 310 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ABCA11PQ4W5N1 156 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 TMEM42Q69YG0 159 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RHBDD2Q6NTF9 364 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 WDR74Q6RFH5 385 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 FBXW12Q6X9E4 464 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ZNF600Q6ZNG1 722 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RD3Q7Z3Z2 195 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MARCH3Q86UD3 253 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 STX12Q86Y82 276 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 FAM90A1Q86YD7 464 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OR2C3Q8N628 320 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 FADS6Q8N9I5 356 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 GATSQ8NAP1 163 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 SUMF2Q8NBJ7 301 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 CADM4Q8NFZ8 388 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OR51T1Q8NGJ9 327 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OR51F2Q8NH61 342 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 NANPQ8TBE9 248 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 OR51E1Q8TCB6 317 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 HPSE2Q8WWQ2 592 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 RTN4IP1Q8WWV3 396 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PINX1Q96BK5 328 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MSI2Q96DH6 328 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 TVP23CQ96ET8 276 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 AKR1E2Q96JD6 320 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 NOL4LQ96MY1 436 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 CLCC1Q96S66 551 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PIGQQ9BRB3 760 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 AGMATQ9BSE5 352 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 ZNF2Q9BSG1 426 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 NICN1Q9BSH3 213 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PAPOLGQ9BWT3 736 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PLK3Q9H4B4 646 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PTGES2Q9H7Z7 377 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PLEKHF2Q9H8W4 249 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 SPACA1Q9HBV2 294 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PNO1Q9NRX1 252 aaKnown RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 CENPMQ9NSP4 180 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 LYRM2Q9NU23 88 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 SOHLH2Q9NX45 425 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 PPP1R14DQ9NXH3 145 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 FOXJ2Q9P0K8 574 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 MIOXQ9UGB7 285 aa4.34□□□□□ -1.71
TGFBR1-205ENST00000548365 THADAQ6YHU6 1953 aa4.33□□□□□ -1.72
TGFBR1-205ENST00000548365 IGKV1-9A0A0C4DH69 117 aa4.33□□□□□ -1.72
TGFBR1-205ENST00000548365 RBFOX3A6NFN3 312 aa4.33□□□□□ -1.72
TGFBR1-205ENST00000548365 ARGFXA6NJG6 315 aa4.33□□□□□ -1.72
TGFBR1-205ENST00000548365 GJE1A6NN92 205 aa4.33□□□□□ -1.72
TGFBR1-205ENST00000548365 C4orf47A7E2U8 309 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms