RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 YLPM1P49750 1951 aaKnown RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 NDUFS8O00217 210 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 ECDO95905 644 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-227ENST00000548080 PTTG1O95997 202 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 AP3S2P59780 193 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 OXA1LQ15070 435 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 MPPED2Q15777 294 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 HFEQ30201 348 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 TRIM16LQ309B1 348 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 SIGIRRQ6IA17 410 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 ZNF826PQ6ZT77 177 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 RTN4RL2Q86UN3 420 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 CENPSQ8N2Z9 138 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 MINDY2Q8NBR6 621 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 POC1AQ8NBT0 407 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 NRIP2Q9BQI9 281 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 C11orf54Q9H0W9 315 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-227ENST00000548080 PLEKHJ1Q9NW61 149 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 HSF4Q9ULV5 492 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 PPP1R3CQ9UQK1 317 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 KCNK7Q9Y2U2 307 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 MTORP42345 2549 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 ABCA2Q9BZC7 2435 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 ZNF205O95201 554 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 USF1P22415 310 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-227ENST00000548080 CHATP28329 748 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 IL2RGP31785 369 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 GNG2P59768 71 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 KLF9Q13886 244 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-227ENST00000548080 IL13RA2Q14627 380 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 NKAPLQ5M9Q1 402 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 WDR82Q6UXN9 313 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 DCDC5Q6ZRR9 648 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 LINC00596Q86U02 117 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 ST8SIA4Q92187 359 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 FN3KRPQ9HA64 309 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 GCM1Q9NP62 436 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 C1orf123Q9NWV4 160 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 TAS2R8Q9NYW2 309 aa14.57□□□□□ -0.08
HDAC7-227ENST00000548080 MEIS3P1A6NDR6 274 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 SERPINE3A8MV23 424 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 H3BUI4 141 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 LYRM1O43325 122 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 CA11O75493 328 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 NXPH2O95156 264 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 LY6G6DO95868 133 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 CYB5R3P00387 301 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-227ENST00000548080 TNFRSF1AP19438 455 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 FUT3P21217 361 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 PMELP40967 661 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 GATA4P43694 442 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 SNU13P55769 128 aaKnown RBP14.56□□□□□ -0.08
HDAC7-227ENST00000548080 ACTBP60709 375 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 ACTG1P63261 375 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 MRPS11P82912 194 aaKnown RBP14.56□□□□□ -0.08
HDAC7-227ENST00000548080 DYRK1AQ13627 763 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 MPV17LQ2QL34 196 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 OLFML2AQ68BL7 652 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 MZT2BQ6NZ67 158 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 GDPD3Q7L5L3 318 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 C6orf201Q7Z4U5 140 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 NUDCD2Q8WVJ2 157 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 C7orf50Q9BRJ6 194 aaKnown RBP14.56□□□□□ -0.08
HDAC7-227ENST00000548080 TMEM106BQ9NUM4 274 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 ZNF581Q9P0T4 197 aa14.56□□□□□ -0.08
HDAC7-227ENST00000548080 hCG_1807616A0A1W2PRN6 198 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 ANKRD20A5PA0PJZ0 165 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 SSX5O60225 188 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 PDCD6O75340 191 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 OR7C1O76099 320 aaPredicted RBP14.55□□□□□ -0.08
HDAC7-227ENST00000548080 ABCA1O95477 2261 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 CSF1P09603 554 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 KRTAP1-1Q07627 177 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 ARFRP1Q13795 201 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 PDCD1Q15116 288 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 FAM201AQ5SY85 155 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 TRAPPC6BQ86SZ2 158 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 OR10Z1Q8NGY1 313 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 HES4Q9HCC6 221 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 IL36RNQ9UBH0 155 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 WIPI2Q9Y4P8 454 aa14.55□□□□□ -0.08
HDAC7-227ENST00000548080 CENPXA8MT69 81 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 FOSL1P15407 271 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 CFHR2P36980 270 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 CBX5P45973 191 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 RFX2P48378 723 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 TMEM33P57088 247 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 LOXL1Q08397 574 aaPredicted RBP14.54□□□□□ -0.08
HDAC7-227ENST00000548080 ATAD3CQ5T2N8 411 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 FIP1L1Q6UN15 594 aaKnown RBP14.54□□□□□ -0.08
HDAC7-227ENST00000548080 CLEC9AQ6UXN8 241 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 ERGIC1Q969X5 290 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 FAAP24Q9BTP7 215 aa14.54□□□□□ -0.08
HDAC7-227ENST00000548080 C3orf80F5H4A9 247 aa14.53□□□□□ -0.08
HDAC7-227ENST00000548080 DUSP1P28562 367 aa14.53□□□□□ -0.08
HDAC7-227ENST00000548080 RCVRNP35243 200 aa14.53□□□□□ -0.08
HDAC7-227ENST00000548080 GMFBP60983 142 aa14.53□□□□□ -0.08
HDAC7-227ENST00000548080 IKZF1Q13422 519 aa14.53□□□□□ -0.08
HDAC7-227ENST00000548080 TMEM249Q2WGJ8 235 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms