RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 LINC00596Q86U02 117 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 SPICQ8N5J4 248 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 Q96M66 194 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 COMMD3Q9UBI1 195 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 FBLN5Q9UBX5 448 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 RAB22AQ9UL26 194 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 SPATA2Q9UM82 520 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 IGKV1D-17A0A075B6S4 117 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SIRPB1O00241 398 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SH2D1BO14796 132 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 GEMIN2O14893 280 aaKnown RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ADAM20O43506 726 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 NDUFA2O43678 99 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 OR7C1O76099 320 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 FSTL3O95633 263 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ZNF44P15621 663 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 RPS2P15880 293 aaKnown RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 PRDX2P32119 198 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 EFNB2P52799 333 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SCN1BQ07699 218 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 PLA2G7Q13093 441 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 DYNC1I2Q13409 638 aaKnown RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ZNF146Q15072 292 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 PDCD1Q15116 288 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 FAM189A2Q15884 450 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 TAF9Q16594 264 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 MPV17LQ2QL34 196 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 CNPY1Q3B7I2 92 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 UBE2NLQ5JXB2 153 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SLC36A1Q7Z2H8 476 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 LRRC28Q86X40 367 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 CD177Q8N6Q3 437 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SAMD12Q8N8I0 201 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 MCFD2Q8NI22 146 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ANGPTL6Q8NI99 470 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 PTX4Q96A99 478 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 CCL13Q99616 98 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 NICN1Q9BSH3 213 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 SLIRPQ9GZT3 109 aaKnown RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-226ENST00000547259 LPAR5Q9H1C0 372 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ZNF665Q9H7R5 613 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 LPAR2Q9HBW0 351 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM165Q9HC07 324 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 RHBDL2Q9NX52 303 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 ZNF222Q9UK12 451 aa10.03□□□□□ -0.8
HDAC7-226ENST00000547259 METTL21EPA6NDL7 271 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A10PA6NDY2 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A18PA6NE21 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A16PA6NEW6 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A20PA6NIJ5 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A8PA6NJQ4 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A7PA6NKC0 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 CEACAM18A8MTB9 384 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A22PA8MWA6 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A12PA8MX19 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A5PA8MXJ8 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A23PA8MXZ1 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 DEGS1O15121 323 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 RGS5O15539 181 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 OR2H2O95918 312 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 CHRM2P08172 466 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A15PP0C7V4 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A13PP0C7W8 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A14PP0C7W9 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM90A24PP0C7X0 464 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 VEGFCP49767 419 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 IL13RA1P78552 427 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 COL10A1Q03692 680 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 ATAD3CQ5T2N8 411 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 DCAF12L2Q5VW00 463 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 METAP1DQ6UB28 335 aaPredicted RBP10.02□□□□□ -0.81
HDAC7-226ENST00000547259 LYPD2Q6UXB3 125 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
HDAC7-226ENST00000547259 BPIFB2Q8N4F0 458 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 ASCC1Q8N9N2 400 aaKnown RBP10.02□□□□□ -0.81
HDAC7-226ENST00000547259 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 PHF21AQ96BD5 680 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 GAFA1Q96PS6 74 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 OR8B2Q96RD0 313 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 TM2D1Q9BX74 207 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 DNTTIP1Q9H147 329 aa10.02□□□□□ -0.81
HDAC7-226ENST00000547259 A0A075B6Q4 140 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 A0A0A6YYD4 124 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 A0A1B0GW55 424 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 HPGDSO60760 199 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 SCGNO76038 276 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 DUX4L2P0CJ85 424 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 DUX4L3P0CJ86 424 aa10.01□□□□□ -0.81
HDAC7-226ENST00000547259 DUX4L4P0CJ87 422 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms