RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF205O95201 554 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 GYPAP02724 150 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 INHBBP09529 407 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 CD3GP09693 182 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 GNB3P16520 340 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 CBX5P45973 191 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 PPP5CP53041 499 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 GNG2P59768 71 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 COL10A1Q03692 680 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 ARFRP1Q13795 201 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 PDCD1Q15116 288 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 DTX3Q8N9I9 347 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 C19orf18Q8NEA5 215 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 FCAMRQ8WWV6 532 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 ST8SIA4Q92187 359 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 FAM168AQ92567 244 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 ABHD1Q96SE0 405 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 TMEM246Q9BRR3 403 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 MIOXQ9UGB7 285 aa13.24□□□□□ -0.29
TRAFD1-203ENST00000547063 FUOMA2VDF0 154 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 TMEM235A6NFC5 223 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 GABARAPH6UMI1 98 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 SIGLEC5O15389 551 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 CSN2P05814 226 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 HOXA4Q00056 320 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 NLRC3Q7RTR2 1065 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF525Q8N782 197 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 SMIM4Q8WVI0 70 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 PERPQ96FX8 193 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 SULT4A1Q9BR01 284 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 PIMREGQ9BSJ6 248 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 FAAP24Q9BTP7 215 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 ZMAT3Q9HA38 289 aaKnown RBP13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 ETAA1Q9NY74 926 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 PCDHB10Q9UN67 800 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 SPG11Q96JI7 2443 aa13.23□□□□□ -0.29
TRAFD1-203ENST00000547063 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 K7N7A8 449 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 TNFRSF13BO14836 293 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 MGST3O14880 152 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 TMPRSS2O15393 492 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 ADAM20O43506 726 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 GSTZ1O43708 216 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF737O75373 536 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 LPLP06858 475 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 PAX5Q02548 391 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 SSBP1Q04837 148 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF79Q15937 498 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 OR8H2Q8N162 312 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 Q8N402 240 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 GAFA1Q96PS6 74 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 CCL13Q99616 98 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 CMSS1Q9BQ75 279 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 CHST6Q9GZX3 395 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 C12orf4Q9NQ89 552 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 KCNK7Q9Y2U2 307 aa13.22□□□□□ -0.29
TRAFD1-203ENST00000547063 HSPB6O14558 160 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 NDUFB3O43676 98 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 PSPNO60542 156 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 TK1P04183 234 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 ACTBP60709 375 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 ACTG1P63261 375 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 MADCAM1Q13477 382 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 GRK1Q15835 563 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 AVPI1Q5T686 147 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 GDPD3Q7L5L3 318 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 LURAP1Q96LR2 239 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 PPA2Q9H2U2 334 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 ZNF581Q9P0T4 197 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 MGAT4AQ9UM21 535 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 MAB21L2Q9Y586 359 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 ARID1AO14497 2285 aa13.21□□□□□ -0.29
TRAFD1-203ENST00000547063 DCHS2Q6V1P9 2916 aa13.21□□□□□ -0.3
TRAFD1-203ENST00000547063 LRBAP50851 2863 aa13.21□□□□□ -0.3
TRAFD1-203ENST00000547063 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 CEACAM18A8MTB9 384 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 GPR37O15354 613 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 RBBP9O75884 186 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 DTYMKP23919 212 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 OR3A1P47881 315 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 NPY4RP50391 375 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 DNM1P46Q6ZS02 220 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 MOB1BQ7L9L4 216 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 ZNRF1Q8ND25 227 aa13.2□□□□□ -0.3
TRAFD1-203ENST00000547063 OR4S1Q8NGB4 309 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms