RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
DDX11-227ENST00000544652 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
DDX11-227ENST00000544652 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
DDX11-227ENST00000544652 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 TRAV24A0A0B4J272 114 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 KIAA1324LA8MWY0 1029 aaPredicted RBP10.86□□□□□ -0.67
DDX11-227ENST00000544652 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 H3BUI4 141 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 SIRPB1O00241 398 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 DVL1O14640 695 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 NDUFB3O43676 98 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 OR7C1O76099 320 aaPredicted RBP10.86□□□□□ -0.67
DDX11-227ENST00000544652 TK1P04183 234 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 CSN2P05814 226 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 GLAP06280 429 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 HEXAP06865 529 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 SELLP14151 372 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 ZNF44P15621 663 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 PITPNBP48739 271 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 PAX5Q02548 391 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 PDCD1Q15116 288 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 WDR25Q64LD2 544 aaPredicted RBP10.86□□□□□ -0.67
DDX11-227ENST00000544652 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 NUDT16L1Q9BRJ7 211 aaKnown RBP10.86□□□□□ -0.67
DDX11-227ENST00000544652 SSBP3Q9BWW4 388 aaPredicted RBP10.86□□□□□ -0.67
DDX11-227ENST00000544652 ABCG5Q9H222 651 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 SPACA1Q9HBV2 294 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 RHBDL2Q9NX52 303 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 MALRD1Q5VYJ5 2156 aa10.86□□□□□ -0.67
DDX11-227ENST00000544652 AKAP9Q99996 3911 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 A0A075B6Q4 140 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 METTL21EPA6NDL7 271 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 RAB27BO00194 218 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 SOCS1O15524 211 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 PDCD6O75340 191 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 FUT3P21217 361 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 GABRR1P24046 479 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 CHATP28329 748 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 OR3A1P47881 315 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 KCNJ3P48549 501 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 TMEM50BP56557 158 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 GNB2P62879 340 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 SCN1BQ07699 218 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 ESCO2Q56NI9 601 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 MZT2AQ6P582 158 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 CIARTQ8N365 385 aaPredicted RBP10.85□□□□□ -0.67
DDX11-227ENST00000544652 FGFRL1Q8N441 504 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 SUMF2Q8NBJ7 301 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 OR4S1Q8NGB4 309 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 OR56B1Q8NGI3 324 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 OR5D13Q8NGL4 314 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 PPP1R35Q8TAP8 253 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
DDX11-227ENST00000544652 CLN8Q9UBY8 286 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 HSF4Q9ULV5 492 aa10.85□□□□□ -0.67
DDX11-227ENST00000544652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.675e-7■□□□□ 11
DDX11-227ENST00000544652 A0A0A6YYH2 397 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 A6NJ64 397 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 H7C1Q1 480 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 MGST3O14880 152 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 FOXH1O75593 365 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 SCGNO76038 276 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 ERP29P30040 261 aaKnown RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 VEGFCP49767 419 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 TMEM249Q2WGJ8 235 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 UBE2NLQ5JXB2 153 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 ATAD3CQ5T2N8 411 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 METAP1DQ6UB28 335 aaPredicted RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 TMEM185AQ8NFB2 350 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 OR10R2Q8NGX6 335 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 C8orf46Q8TAG6 207 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 DACT3Q96B18 629 aaPredicted RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 DPCDQ9BVM2 203 aaPredicted RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 ATG5Q9H1Y0 275 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
DDX11-227ENST00000544652 ZNF469Q96JG9 3925 aaPredicted RBP10.84□□□□□ -0.67
DDX11-227ENST00000544652 PPIAL4CA0A0B4J2A2 164 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 ECDO95905 644 aaPredicted RBP10.83□□□□□ -0.68
DDX11-227ENST00000544652 APOA1P02647 267 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
DDX11-227ENST00000544652 PRR20EP86478 221 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PRR20CP86479 221 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PRR20DP86480 221 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PRR20BP86481 221 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PRR20AP86496 221 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PAX2Q02962 417 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 RBM39Q14498 530 aaKnown RBP10.83□□□□□ -0.68
DDX11-227ENST00000544652 GRK1Q15835 563 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PAN3Q58A45 887 aaKnown RBP10.83□□□□□ -0.68
DDX11-227ENST00000544652 PLAC9Q5JTB6 97 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 CMTM4Q8IZR5 234 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 GAPTQ8N292 157 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms