RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 OR5A2Q8NGI9 324 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 OR51F2Q8NH61 342 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 SLC25A40Q8TBP6 338 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
VPS33A-209ENST00000544349 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 IL36GQ9NZH8 169 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 MPC1Q9Y5U8 109 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 A8MXE2 369 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 KRBOX1C9JBD0 128 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 GPM6AP51674 278 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 CHRFAM7AQ494W8 412 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 TIMM23BQ5SRD1 257 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 EIF4E3Q8N5X7 224 aaKnown RBP12.23□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF611Q8N823 705 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 INO80EQ8NBZ0 244 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-209ENST00000544349 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 HIST1H2AAQ96QV6 131 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 Q9UFV3 132 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF732B4DXR9 585 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF205O95201 554 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 BMP5P22003 454 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 RBPJQ06330 500 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 SNTB1Q13884 538 aaKnown RBP12.22□□□□□ -0.45
VPS33A-209ENST00000544349 TAF9Q16594 264 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 UNQ6494/PRO21346Q6UXR6 183 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 BOLLQ8N9W6 283 aaKnown RBP12.22□□□□□ -0.45
VPS33A-209ENST00000544349 OR5P3Q8WZ94 311 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 PIK3IP1Q96FE7 263 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 LIME1Q9H400 295 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 RAB18Q9NP72 206 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 TEX13DA0A0J9YY54 714 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-209ENST00000544349 KNG1P01042 644 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 RAC2P15153 192 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 BTN1A1Q13410 526 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 ATRAIDQ6UW56 229 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 SLC25A26Q70HW3 274 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 TMEM17Q86X19 198 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 FAAP24Q9BTP7 215 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 PLEKHJ1Q9NW61 149 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 SH3BGRL2Q9UJC5 107 aa12.22□□□□□ -0.45
VPS33A-209ENST00000544349 ATMQ13315 3056 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 A0A0B4J2A0 478 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 SFTPBP07988 381 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 CA6P23280 308 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 HAAOP46952 286 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 KLRB1Q12918 225 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 PIGYQ3MUY2 71 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 OSR2Q8N2R0 312 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 POC1AQ8NBT0 407 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 ZCCHC14Q8WYQ9 949 aaKnown RBP12.21□□□□□ -0.45
VPS33A-209ENST00000544349 PHYHIPLQ96FC7 376 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF2Q9BSG1 426 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-209ENST00000544349 PCDHB16Q9NRJ7 776 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 SHPKQ9UHJ6 478 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 AK3Q9UIJ7 227 aa12.21□□□□□ -0.45
VPS33A-209ENST00000544349 PRR14LQ5THK1 2151 aa12.21□□□□□ -0.46
VPS33A-209ENST00000544349 IGHV2OR16-5A0A0B4J2B6 119 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 F8VVB4 439 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 F8VWA3 439 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 HOXB5P09067 269 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 SMUG1Q53HV7 270 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 PAN3Q58A45 887 aaKnown RBP12.2□□□□□ -0.46
VPS33A-209ENST00000544349 BRICD5Q6PL45 260 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 MRGPRGQ86SM5 289 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 SAXO1Q8IYX7 474 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 Q8NFD4 153 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 OR1S2Q8NGQ3 325 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 KLF14Q8TD94 323 aaPredicted RBP12.2□□□□□ -0.46
VPS33A-209ENST00000544349 MARS2Q96GW9 593 aaKnown RBP12.2□□□□□ -0.46
VPS33A-209ENST00000544349 SULT4A1Q9BR01 284 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 CACNA1AO00555 2505 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 OR5B21A6NL26 309 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 IQCF6A8MYZ5 107 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 CA11O75493 328 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 SELEP16581 610 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 TUBG1P23258 451 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 FAM27E3Q08E93 113 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 PSG7Q13046 419 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 RAB32Q13637 225 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 BATF2Q8N1L9 274 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 STOML3Q8TAV4 291 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 TUBG2Q9NRH3 451 aa12.2□□□□□ -0.46
VPS33A-209ENST00000544349 FAM221AA4D161 298 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 GEMIN2O14893 280 aaKnown RBP12.19□□□□□ -0.46
VPS33A-209ENST00000544349 CHATP28329 748 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 MPV17P39210 176 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 NPBWR2P48146 333 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 GNG3P63215 75 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 NAAAQ02083 359 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms