RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
SMG8-202ENST00000543872 COL4A6Q14031 1691 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 TCRBV21S2A2A0A5A6 115 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 PROB1E7EW31 1015 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 H3BML4 177 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 HBE1P02100 147 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 GNB2P62879 340 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 PDCD1Q15116 288 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 C11orf42Q8N5U0 333 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 NCOR1P1Q9H4R4 102 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 SDF2L1Q9HCN8 221 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 CBY3A6NI87 242 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 SHISA7A6NL88 538 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 ZNF17P17021 662 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 GZMHP20718 246 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 OR1D4P47884 311 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 FOXF1Q12946 379 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 SPIN3Q5JUX0 258 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 UBE2J1Q9Y385 318 aaPredicted RBP11.03□□□□□ -0.64
SMG8-202ENST00000543872 CLDN16Q9Y5I7 305 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 A0A1B0GUS0 222 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 ACRP10323 421 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 RAC2P15153 192 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 FAHP16930 419 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 RTP5Q14D33 572 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 HLA-DQA1Q5Y7H0 255 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 FAM89BQ8N5H3 189 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
SMG8-202ENST00000543872 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 TP53RKQ96S44 253 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 FOXJ2Q9P0K8 574 aa11.03□□□□□ -0.64
SMG8-202ENST00000543872 CHD7Q9P2D1 2997 aa11.02□□□□□ -0.64
SMG8-202ENST00000543872 TMEM238LA0A1B0GVL6 79 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 BRS3P32247 399 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 ECI1P42126 302 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 FBXW4P57775 412 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 HSF1Q00613 529 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 MFAP5Q13361 173 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 TSLPQ969D9 159 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 MSI2Q96DH6 328 aaKnown RBP11.02□□□□□ -0.65
SMG8-202ENST00000543872 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
SMG8-202ENST00000543872 SDSLQ96GA7 329 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 C18orf12Q96KH6 178 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 SMIM7Q9BQ49 75 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 PLA2G3Q9NZ20 509 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 POLR3KQ9Y2Y1 108 aaPredicted RBP11.02□□□□□ -0.65
SMG8-202ENST00000543872 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 MSTNO14793 375 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 CDKN1BP46527 198 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 PRSS12P56730 875 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 ZFP36L1Q07352 338 aaKnown RBP11.02□□□□□ -0.65
SMG8-202ENST00000543872 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.65
SMG8-202ENST00000543872 SLC25A26Q70HW3 274 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 NOXO1Q8NFA2 376 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 IL22RA2Q969J5 263 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 TBX15Q96SF7 602 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 NECAP2Q9NVZ3 263 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 VDAC3Q9Y277 283 aa11.02□□□□□ -0.65
SMG8-202ENST00000543872 F5H5K5 113 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 H7BYZ3 331 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 PITX3O75364 302 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 GALR1P47211 349 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 ZNF695Q8IW36 515 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 ALKBH3Q96Q83 286 aaPredicted RBP11.01□□□□□ -0.65
SMG8-202ENST00000543872 MTCH2Q9Y6C9 303 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 TDRD6O60522 2096 aaKnown RBP11.01□□□□□ -0.65
SMG8-202ENST00000543872 M0QZK8 103 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 GGCTO75223 188 aaKnown RBP11.01□□□□□ -0.65
SMG8-202ENST00000543872 CEACAM1P13688 526 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 CNKSR3Q6P9H4 555 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 KCNK17Q96T54 332 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 RSG1Q9BU20 258 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 UNC13CQ8NB66 2214 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
SMG8-202ENST00000543872 HPRT1P00492 218 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 CLPSP04118 112 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 IFI6P09912 130 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 BCL2P10415 239 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 GALNSP34059 522 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 HERV-K104P61576 105 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 PLCXD2Q0VAA5 305 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 ABLIM2Q6H8Q1 611 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 VSIRQ9H7M9 311 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 RPRMQ9NS64 109 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
SMG8-202ENST00000543872 LHFPL6Q9Y693 200 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 SDK1Q7Z5N4 2213 aa11.01□□□□□ -0.65
SMG8-202ENST00000543872 CCDC85CA6NKD9 419 aa11□□□□□ -0.65
SMG8-202ENST00000543872 E9PLN8 166 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms