RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 OR4D6Q8NGJ1 314 aa21.19■□□□□ 0.98
CHFR-218ENST00000540963 TMEM163Q8TC26 289 aa21.19■□□□□ 0.98
CHFR-218ENST00000540963 ADI1Q9BV57 179 aa21.19■□□□□ 0.98
CHFR-218ENST00000540963 KRT84Q9NSB2 600 aa21.19■□□□□ 0.98
CHFR-218ENST00000540963 H2AFY2Q9P0M6 372 aaPredicted RBP21.19■□□□□ 0.98
CHFR-218ENST00000540963 G3V2T6 193 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 FGF16O43320 207 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 CSN2P05814 226 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 PRKACAP17612 351 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 BCL3P20749 454 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 PTGFRP43088 359 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 SLC35B1P78383 322 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 SSX6Q7RTT6 188 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 KLHL30-AS1Q8NEE0 82 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 TFAP2CQ92754 450 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 IL4I1Q96RQ9 567 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 HMG20AQ9NP66 347 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 EXOSC4Q9NPD3 245 aaKnown RBP21.18■□□□□ 0.98
CHFR-218ENST00000540963 AP4S1Q9Y587 144 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 STAB2Q8WWQ8 2551 aa21.18■□□□□ 0.98
CHFR-218ENST00000540963 ZNF695Q8IW36 515 aa21.17■□□□□ 0.98
CHFR-218ENST00000540963 YIPF7Q8N8F6 280 aa21.17■□□□□ 0.98
CHFR-218ENST00000540963 FAM172BPA6NC97 362 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 RPP14O95059 124 aaKnown RBP21.16■□□□□ 0.98
CHFR-218ENST00000540963 OR2H2O95918 312 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 GDNFP39905 211 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 ODF4Q2M2E3 257 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 NKAPLQ5M9Q1 402 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 C5orf56Q8N8D9 126 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 OR9G1Q8NH87 305 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 RPEQ96AT9 228 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 CIB1Q99828 191 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 RHOFQ9HBH0 211 aa21.16■□□□□ 0.98
CHFR-218ENST00000540963 AMMECR1Q9Y4X0 333 aaPredicted RBP21.16■□□□□ 0.98
CHFR-218ENST00000540963 ODAMA1E959 279 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 ZNF729A6NN14 1252 aaPredicted RBP21.15■□□□□ 0.98
CHFR-218ENST00000540963 SIRPB1O00241 398 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 PRKACBP22694 351 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 FASP25445 335 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 GLIPR1P48060 266 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 AESQ08117 197 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 C18orf65Q6ZTR6 163 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 TOMM40LQ969M1 308 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 COMMD4Q9H0A8 199 aa21.15■□□□□ 0.98
CHFR-218ENST00000540963 SERPINE3A8MV23 424 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 SULT1C4O75897 302 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 IGHG2P01859 326 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 SNRNP70P08621 437 aaKnown RBP21.14■□□□□ 0.97
CHFR-218ENST00000540963 POU3F4P49335 361 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 MTCP1P56278 107 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 LHFPL2Q6ZUX7 228 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 UTS2BQ765I0 119 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 ZDHHC13Q8IUH4 622 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 GID4Q8IVV7 300 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 CHST4Q8NCG5 386 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 RNF166Q96A37 237 aaPredicted RBP21.14■□□□□ 0.97
CHFR-218ENST00000540963 NOL4LQ96MY1 436 aaPredicted RBP21.14■□□□□ 0.97
CHFR-218ENST00000540963 GSTK1Q9Y2Q3 226 aa21.14■□□□□ 0.97
CHFR-218ENST00000540963 METTL15A6NJ78 407 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 CCL24O00175 119 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 UBCP0CG48 685 aaKnown RBP21.13■□□□□ 0.97
CHFR-218ENST00000540963 PDZK1IP1Q13113 114 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 RBM39Q14498 530 aaKnown RBP21.13■□□□□ 0.97
CHFR-218ENST00000540963 C9orf66Q5T8R8 295 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 C1orf146Q5VVC0 180 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 FOXRED2Q8IWF2 684 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 SPSB1Q96BD6 273 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 OR6C3Q9NZP0 311 aa21.13■□□□□ 0.97
CHFR-218ENST00000540963 IGKV1-9A0A0C4DH69 117 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 OR2T7P0C7T2 308 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 SNU13P55769 128 aaKnown RBP21.12■□□□□ 0.97
CHFR-218ENST00000540963 C17orf58Q2M2W7 97 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 KRBOX4Q5JUW0 171 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 SLC35E3Q7Z769 313 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 OR56B4Q8NH76 319 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 RAX2Q96IS3 184 aa21.12■□□□□ 0.97
CHFR-218ENST00000540963 KBTBD11-OT1A0A1B0GTJ5 212 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 H3BSH0 61 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 APOL3O95236 402 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 TMEM11P17152 192 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 ATF1P18846 271 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 RAB7AP51149 207 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 TEX38Q6PEX7 206 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 OR8H3Q8N146 312 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 STPG2Q8N412 459 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 OR5M8Q8NGP6 311 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 COQ2Q96H96 371 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 KIRREL1Q96J84 757 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 TBX5Q99593 518 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 WARS2Q9UGM6 360 aaKnown RBP21.11■□□□□ 0.97
CHFR-218ENST00000540963 OAZ3Q9UMX2 235 aa21.11■□□□□ 0.97
CHFR-218ENST00000540963 LOC107986453A0A1B0GWG9 222 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 A0A1W2PPI3 338 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 A0A1W2PQL4 384 aaPredicted RBP21.1■□□□□ 0.97
CHFR-218ENST00000540963 KDM4BO94953 1096 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 CALCBP10092 127 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 CHATP28329 748 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 OR8U1Q8NH10 309 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 OSBPL10Q9BXB5 764 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 GON7Q9BXV9 100 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms