RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF121P58317 390 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 RUNX1Q01196 453 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ZNF616Q08AN1 781 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 CYLC2Q14093 348 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 SRSF7Q16629 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 PLAC9Q5JTB6 97 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ASPHD1Q5U4P2 390 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 LCN1P1Q5VSP4 162 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ACSM6Q6P461 480 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 Q6ZWC4 215 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 TCF23Q7RTU1 214 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 CYP4Z1Q86W10 505 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ZNF573Q86YE8 665 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 OR8H2Q8N162 312 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 MREGQ8N565 214 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 FAM86B1Q8N7N1 296 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ASCC1Q8N9N2 400 aaKnown RBP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 OR8J3Q8NGG0 315 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 OR1N2Q8NGR9 330 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 OR2T4Q8NH00 348 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 FANK1Q8TC84 345 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 RNF133Q8WVZ7 376 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 EME1Q96AY2 570 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 ZNF488Q96MN9 340 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 EBF4Q9BQW3 602 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 IFT27Q9BW83 186 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 GHITMQ9H3K2 345 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 FN3KQ9H479 309 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 HES4Q9HCC6 221 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 HEYLQ9NQ87 328 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 OR14J1Q9UGF5 321 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 SLC22A13Q9Y226 551 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 POLDIP2Q9Y2S7 368 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 UBE2J1Q9Y385 318 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-214ENST00000540865 COMMD3-BMI1R4GMX3 469 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 PKD1P98161 4303 aa3.55□□□□□ -1.84
SNHG1-214ENST00000540865 TMEM120BA0PK00 339 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 LINC01548A6NM66 108 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 H3BSH0 61 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 I3L521 148 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 TOR1AO14656 332 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 MMP23AO75900 390 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 INMTO95050 263 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 IGLV2-14P01704 120 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 H1F0P07305 194 aaKnown RBP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 HNRNPCP07910 306 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ATP6V1B1P15313 513 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 TMEM11P17152 192 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 PSMB8P28062 276 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 FMO3P31513 532 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 OPRL1P41146 370 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 HAAOP46952 286 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 GPR12P47775 334 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 BLVRAP53004 296 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 PRRX1P54821 245 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 TIRAPP58753 221 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ISL1P61371 349 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ERVK11-1P61568 191 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 CBX1P83916 185 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 CFHR3Q02985 330 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 GABPB1Q06547 395 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 HES1Q14469 280 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 HLA-DRB5Q30154 266 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 IFI44LQ53G44 452 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 CEP78Q5JTW2 689 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 RNLSQ5VYX0 342 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 HEPN1Q6WQI6 88 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 VTCN1Q7Z7D3 282 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 TGIF2LXQ8IUE1 241 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 PGAM4Q8N0Y7 254 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 FAM81AQ8TBF8 368 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ZNRF4Q8WWF5 429 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 DCUN1D4Q92564 292 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 UBE2E2Q96LR5 201 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 C7orf26Q96N11 449 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ABHD6Q9BV23 337 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ABCG5Q9H222 651 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 SLC25A32Q9H2D1 315 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 OR52D1Q9H346 318 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 GAL3ST2Q9H3Q3 398 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 CCDC134Q9H6E4 229 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 NIPAL2Q9H841 368 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 DNAJC27Q9NZQ0 273 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 DNAJB9Q9UBS3 223 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 VSIG4Q9Y279 399 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 ENPP4Q9Y6X5 453 aa3.54□□□□□ -1.84
SNHG1-214ENST00000540865 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
SNHG1-214ENST00000540865 A0A087X0M5 115 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 TRGV10A0A0A0MS01 117 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 TRBV4-1A0A0J9YWV2 114 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 A0A1B0GX30 115 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 MAGEA13PA6NCF6 341 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 FXYD1O00168 92 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 HSPA12AO43301 675 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 SPRY2O43597 315 aa3.53□□□□□ -1.84
SNHG1-214ENST00000540865 ZNF682O95780 498 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms