RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 LINC01548A6NM66 108 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 LOC110117498-PIK3R3F6TDL0 507 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 SRSF10O75494 262 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 DUSP1P28562 367 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 OR3A1P47881 315 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 FUT6P51993 359 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 CDC42P60953 191 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 RBM39Q14498 530 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 ZNF146Q15072 292 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 UBE2V2Q15819 145 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 LRRC36Q1X8D7 754 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 ZFAND6Q6FIF0 208 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 OR2T5Q6IEZ7 315 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 Q8IYB0 196 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 DRAM1Q8N682 238 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 BBS1Q8NFJ9 593 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 OR10G2Q8NGC3 310 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 OR2T29Q8NH02 315 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 RPEQ96AT9 228 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 EME1Q96AY2 570 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 FEVQ99581 238 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 GON7Q9BXV9 100 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 IKZF2Q9UKS7 526 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 TMEM14AQ9Y6G1 99 aa9.12□□□□□ -0.95
CLSTN3-209ENST00000539982 KIAA2026Q5HYC2 2103 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 SAC3D1A6NKF1 404 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 LY86O95711 162 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 TMEM11P17152 192 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 INSL3P51460 131 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 APOFQ13790 326 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 HES1Q14469 280 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 BCL2L15Q5TBC7 163 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 OVCH2Q7RTZ1 564 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 FAM58AQ8N1B3 248 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 OR4D6Q8NGJ1 314 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 OR56B4Q8NH76 319 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 HRASLS5Q96KN8 279 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 CIB1Q99828 191 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 C9orf16Q9BUW7 83 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 VCXQ9H320 206 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 C8orf4Q9NR00 106 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 RBFOX1Q9NWB1 397 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 OR52A1Q9UKL2 312 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 OAZ3Q9UMX2 235 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 COPS3Q9UNS2 423 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 R4GMQ9 66 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 CSMD3Q7Z407 3707 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 SORL1Q92673 2214 aa9.11□□□□□ -0.95
CLSTN3-209ENST00000539982 TRBV2A0A0J9YWF9 115 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 G3V2T6 193 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 AP4M1O00189 453 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 CCRL2O00421 344 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 SH2D1BO14796 132 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 ENTPD6O75354 484 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 ELANEP08246 267 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 MRPL3P09001 348 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 CCL1P22362 96 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 PTGFRP43088 359 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 GLIPR1P48060 266 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 NPBWR2P48146 333 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 CDK5Q00535 292 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 AESQ08117 197 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 FOXE3Q13461 319 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 GPR50Q13585 617 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 HNF4GQ14541 408 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 SPIN3Q5JUX0 258 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 UTF1Q5T230 341 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 IZUMO2Q6UXV1 221 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 ZDHHC13Q8IUH4 622 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 PACRGLQ8N7B6 248 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 OR9G1Q8NH87 305 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 GIPC3Q8TF64 312 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 NRBF2Q96F24 287 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 BORCS8Q96FH0 119 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 APOL4Q9BPW4 351 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 TTTY10Q9BZA0 68 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 AMMECR1Q9Y4X0 333 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 SNX5Q9Y5X3 404 aa9.1□□□□□ -0.95
CLSTN3-209ENST00000539982 A0A1W2PPI3 338 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 ZNF729A6NN14 1252 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 SIRPB1O00241 398 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 MAGEB4O15481 346 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 GATBO75879 557 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 SERPINA3P01011 423 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 FRMD6-AS1P0C7T7 363 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 CALCBP10092 127 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 PRKACAP17612 351 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 BCL3P20749 454 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 NFYBP25208 207 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 FHL3Q13643 280 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 GK3PQ14409 553 aa9.09□□□□□ -0.95
CLSTN3-209ENST00000539982 C17orf58Q2M2W7 97 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms