RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 BORCS8Q96FH0 119 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 HRASLS5Q96KN8 279 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 TEX12Q9BXU0 123 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 NKX1-2Q9UD57 310 aaPredicted RBP11.07□□□□□ -0.64
PBX3-212ENST00000538998 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
PBX3-212ENST00000538998 A0A1W2PPI3 338 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 SIRPB1O00241 398 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 CCRL2O00421 344 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 SH2D1BO14796 132 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 PRKACAP17612 351 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 ATP6V1B2P21281 511 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 GLIPR1P48060 266 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 CDK5Q00535 292 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 FHL3Q13643 280 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 ZFAND6Q6FIF0 208 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 ZNF322Q6U7Q0 402 aaPredicted RBP11.06□□□□□ -0.64
PBX3-212ENST00000538998 RNF152Q8N8N0 203 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 C4orf3Q8WVX3 66 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 CNN2Q99439 309 aaKnown RBP11.06□□□□□ -0.64
PBX3-212ENST00000538998 CHST5Q9GZS9 411 aa11.06□□□□□ -0.64
PBX3-212ENST00000538998 EXOSC4Q9NPD3 245 aaKnown RBP11.06□□□□□ -0.64
PBX3-212ENST00000538998 TCRBV5S2A0A599 114 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 ODAMA1E959 279 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 CCDC182A6NF36 153 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 ERICH4A6NGS2 130 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 ZNF729A6NN14 1252 aaPredicted RBP11.05□□□□□ -0.64
PBX3-212ENST00000538998 CIB2O75838 187 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 OR2H2O95918 312 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 SERPINA3P01011 423 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 ELANEP08246 267 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 BCL3P20749 454 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 NPBWR2P48146 333 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 RAB7AP51149 207 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 SNU13P55769 128 aaKnown RBP11.05□□□□□ -0.64
PBX3-212ENST00000538998 CXCR4P61073 352 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 AESQ08117 197 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 MADCAM1Q13477 382 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 GPR50Q13585 617 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
PBX3-212ENST00000538998 HNF4GQ14541 408 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 FAM98BQ52LJ0 330 aaKnown RBP11.05□□□□□ -0.64
PBX3-212ENST00000538998 FAM27D1Q5T7N8 215 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 DHFR2Q86XF0 187 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 OR8H3Q8N146 312 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
PBX3-212ENST00000538998 SYT7O43581 403 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 IGKV1D-33P01593 117 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 IGKV1-33P01594 117 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 CSN2P05814 226 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 OSMP13725 252 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 NFYBP25208 207 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 GPR12P47775 334 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 POU3F4P49335 361 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 RBP2P50120 134 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 ATP1B3P54709 279 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 PLEKHG7Q6ZR37 379 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 TGIF2LXQ8IUE1 241 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 CCDC54Q8NEL0 328 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 DNAAF1Q8NEP3 725 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 ASB9Q96DX5 294 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 KIRREL1Q96J84 757 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 MNTQ99583 582 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 ZNF556Q9HAH1 456 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 HMG20AQ9NP66 347 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 KRT84Q9NSB2 600 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 GSTK1Q9Y2Q3 226 aa11.04□□□□□ -0.64
PBX3-212ENST00000538998 LINC01548A6NM66 108 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 J3QR06 171 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 RRP9O43818 475 aaKnown RBP11.03□□□□□ -0.64
PBX3-212ENST00000538998 CALCBP10092 127 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 ODF4Q2M2E3 257 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 C17orf58Q2M2W7 97 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 KRBOX4Q5JUW0 171 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 UTF1Q5T230 341 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 HAVCR2Q8TDQ0 301 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 C10orf35Q96D05 121 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 RNFT2Q96EX2 444 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 ABCG5Q9H222 651 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 SLC25A19Q9HC21 320 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 LIN7CQ9NUP9 197 aaKnown RBP11.03□□□□□ -0.64
PBX3-212ENST00000538998 OR6C3Q9NZP0 311 aa11.03□□□□□ -0.64
PBX3-212ENST00000538998 MRM2Q9UI43 246 aaKnown RBP11.03□□□□□ -0.64
PBX3-212ENST00000538998 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.64
PBX3-212ENST00000538998 KBTBD11-OT1A0A1B0GTJ5 212 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.65
PBX3-212ENST00000538998 ZNF670-ZNF695F2Z2N8 137 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 MAGEB4O15481 346 aaPredicted RBP11.02□□□□□ -0.65
PBX3-212ENST00000538998 CST1P01037 141 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 OR8U8P0C7N1 319 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 MS4A2Q01362 244 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 FLOT2Q14254 428 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.65
PBX3-212ENST00000538998 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms