RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TAS2R3Q9NYW6 316 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 A0A0G2JK05 382 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 ODAMA1E959 279 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 SLC33A1O00400 549 aaPredicted RBP9.36□□□□□ -0.91
RTN3-209ENST00000538995 GABRPO00591 440 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 TIMM23O14925 209 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 DEGS1O15121 323 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 CALCBP10092 127 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 GABRA5P31644 462 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 PAX5Q02548 391 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 ST3GAL4Q11206 333 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 YIF1BQ5BJH7 314 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 OR52W1Q6IF63 320 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 HEPN1Q6WQI6 88 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 ASCL4Q6XD76 172 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 LHFPL4Q7Z7J7 247 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 ZNF485Q8NCK3 441 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 OR51T1Q8NGJ9 327 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 OR4C13Q8NGP0 309 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 TNFAIP8L1Q8WVP5 186 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 GGHQ92820 318 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 CLEC7AQ9BXN2 247 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 NCOR1P1Q9H4R4 102 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 PLCXD1Q9NUJ7 323 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 IL36GQ9NZH8 169 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 FBLN5Q9UBX5 448 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 CLEC2DQ9UHP7 191 aa9.36□□□□□ -0.91
RTN3-209ENST00000538995 SIRT4Q9Y6E7 314 aaPredicted RBP9.36□□□□□ -0.91
RTN3-209ENST00000538995 MEX3AA1L020 520 aaKnown RBP9.35□□□□□ -0.91
RTN3-209ENST00000538995 M0QZ24 198 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 GPX5O75715 221 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 LALBAP00709 142 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 GNAO1P09471 354 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 FSTP19883 344 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 CD34P28906 385 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PTGFRP43088 359 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 KIR2DS4P43632 304 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 KCNJ3P48549 501 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 DYNC1I2Q13409 638 aaKnown RBP9.35□□□□□ -0.91
RTN3-209ENST00000538995 RIPK1Q13546 671 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 RSU1Q15404 277 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 LY6EQ16553 131 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 Q499Y3 187 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 KRBOX4Q5JUW0 171 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 RTN4RL2Q86UN3 420 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 THRSPQ92748 146 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 GHSRQ92847 366 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 COQ2Q96H96 371 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PGLYRP3Q96LB9 341 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 IFT22Q9H7X7 185 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 DCLRE1BQ9H816 532 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 ABCB10Q9NRK6 738 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PAK1IP1Q9NWT1 392 aaPredicted RBP9.35□□□□□ -0.91
RTN3-209ENST00000538995 CKLFQ9UBR5 152 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PSORS1C1Q9UIG5 152 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 TCF19Q9Y242 345 aa9.35□□□□□ -0.91
RTN3-209ENST00000538995 ZNF729A6NN14 1252 aaPredicted RBP9.34□□□□□ -0.91
RTN3-209ENST00000538995 H0YJX3 145 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 MYL12BO14950 172 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 ZNF780AO75290 641 aaPredicted RBP9.34□□□□□ -0.91
RTN3-209ENST00000538995 CD1AP06126 327 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 IGFBP3P17936 291 aaPredicted RBP9.34□□□□□ -0.91
RTN3-209ENST00000538995 CDK2P24941 298 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 BDKRB2P30411 391 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 ZNF93P35789 620 aaPredicted RBP9.34□□□□□ -0.91
RTN3-209ENST00000538995 GLIPR1P48060 266 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 KRTAP10-3P60369 221 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 BDH1Q02338 343 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 SCN1BQ07699 218 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 AESQ08117 197 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 FAM189A2Q15884 450 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 SSX2Q16385 188 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
RTN3-209ENST00000538995 LDLRAD2Q5SZI1 272 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 DDI2Q5TDH0 399 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 SLC35E4Q6ICL7 350 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 LAIR2Q6ISS4 152 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 LINC00596Q86U02 117 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 DYNAPQ8N1N2 210 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 OR4P4Q8NGL7 312 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 NDNFQ8TB73 568 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 TFAP2CQ92754 450 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 CREB3L1Q96BA8 519 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 FAM192AQ9GZU8 254 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 METTL9Q9H1A3 318 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 TCF7L1Q9HCS4 588 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 PCDHB16Q9NRJ7 776 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 FKBP14Q9NWM8 211 aa9.34□□□□□ -0.91
RTN3-209ENST00000538995 DSCAML1Q8TD84 2053 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms