RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 GGNBP1Q5YKI7 109 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 P4HA3Q7Z4N8 544 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 FOXRED2Q8IWF2 684 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 SAXO1Q8IYX7 474 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 OR5P3Q8WZ94 311 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 OPA3Q9H6K4 179 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 TAF9BQ9HBM6 251 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 ESPL1Q14674 2120 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 DSPP15924 2871 aaKnown RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 IGHG3P01860 377 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 CELA3BP08861 270 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 IL32P24001 234 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 PMELP40967 661 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF169Q14929 603 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 C10orf91Q5T1B1 145 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 RPL7L1Q6DKI1 246 aaKnown RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 OR2T2Q6IF00 324 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 IGFL2Q6UWQ7 119 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 OR4A4PQ8NGN8 299 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 EXTL1Q92935 676 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 MRPL24Q96A35 216 aaKnown RBP11.45□□□□□ -0.58
VPS33B-202ENST00000535906 GALNT14Q96FL9 552 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 POM121Q96HA1 1249 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 SMIM8Q96KF7 97 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 HIST1H2AAQ96QV6 131 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 CLCF1Q9UBD9 225 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF292O60281 2723 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 PTPRBP23467 1997 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A10PA6NDY2 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A18PA6NE21 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A16PA6NEW6 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A20PA6NIJ5 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A8PA6NJQ4 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A7PA6NKC0 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A22PA8MWA6 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A12PA8MX19 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A5PA8MXJ8 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A23PA8MXZ1 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 K7EPK0 472 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 GPR31O00270 319 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A15PP0C7V4 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A13PP0C7W8 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A14PP0C7W9 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM90A24PP0C7X0 464 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 DUSP1P28562 367 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 SP6Q3SY56 376 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 IGSF11Q5DX21 431 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 HAGHLQ6PII5 290 aaPredicted RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 DPPA2Q7Z7J5 298 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 FAM71E2Q8N5Q1 922 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 NAA60Q9H7X0 242 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 ATP6V1G2-DDX39BF2Z307 99 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 TRAPPC2LH3BP13 241 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 IGHV1-2P23083 117 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM187Q14656 261 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 OR2A2Q6IF42 318 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 MKXQ8IYA7 352 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 PUSL1Q8N0Z8 303 aaKnown RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 OR5T2Q8NGG2 359 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF488Q96MN9 340 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 TRIB1Q96RU8 372 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 PRRX2Q99811 253 aa11.44□□□□□ -0.58
VPS33B-202ENST00000535906 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
VPS33B-202ENST00000535906 F8W036 122 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 HSPB6O14558 160 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF14P17017 642 aaPredicted RBP11.43□□□□□ -0.58
VPS33B-202ENST00000535906 CA6P23280 308 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 ABCA11PQ4W5N1 156 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 PHLDA2Q53GA4 152 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 OR5L1Q8NGL2 311 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 RTN4IP1Q8WWV3 396 aaPredicted RBP11.43□□□□□ -0.58
VPS33B-202ENST00000535906 MOB3AQ96BX8 217 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 SLC2A9Q9NRM0 540 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 PURGQ9UJV8 347 aaKnown RBP11.43□□□□□ -0.58
VPS33B-202ENST00000535906 MPC1Q9Y5U8 109 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 LRP3O75074 770 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 LYZL6O75951 148 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 GAPDHP04406 335 aaKnown RBP11.43□□□□□ -0.58
VPS33B-202ENST00000535906 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 GLI4P10075 376 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 AADACP22760 399 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 GUCA2BQ16661 112 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 LRTM2Q8N967 370 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms