RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GVQW1Q8N7I0 195 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 OR2M3Q8NG83 312 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 OR10A7Q8NGE5 316 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 Q8WTZ3 238 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 INHBBP09529 407 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 FAM87AP0C7U9 286 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 HMGA2P52926 109 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 J3KRW8 73 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 CRXO43186 299 aaPredicted RBP16■□□□□ 0.15
SFSWAP-203ENST00000535236 FGF8P55075 233 aaPredicted RBP16■□□□□ 0.15
SFSWAP-203ENST00000535236 PRSS54Q6PEW0 395 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 CLN8Q9UBY8 286 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
SFSWAP-203ENST00000535236 MPC2O95563 127 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 NQO2P16083 231 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 CSF2RBP32927 897 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 CAMPP49913 170 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 DUSP18Q8NEJ0 188 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 INO80CQ6PI98 192 aaPredicted RBP16■□□□□ 0.15
SFSWAP-203ENST00000535236 ABHD3Q8WU67 409 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 LPAR2Q9HBW0 351 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 HLA-GP17693 338 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 C1QL3Q5VWW1 255 aa16■□□□□ 0.15
SFSWAP-203ENST00000535236 LAMB1P07942 1786 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 AREGP15514 252 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 RPS4XP62701 263 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 KCNMB1Q16558 191 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 TMEM116Q8NCL8 245 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 FLYWCH2Q96CP2 140 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 GMPPAQ96IJ6 420 aaPredicted RBP15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 ANXA10Q9UJ72 324 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 PAFAH1B2P68402 229 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 SLC26A10Q8NG04 563 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 GEMIN2O14893 280 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 WDR73Q6P4I2 378 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 ASCL3Q9NQ33 180 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 SYNGR2O43760 224 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 CD40P25942 277 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 DYNLT3P51808 116 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 POLR2GP62487 172 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 PSG6Q00889 435 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 ANKRD55Q3KP44 614 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 SLC35B3Q9H1N7 401 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 CES1P1Q9UKY3 287 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 WASHC3Q9Y3C0 194 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 ITGB4P16144 1822 aa15.99■□□□□ 0.15
SFSWAP-203ENST00000535236 J3QT63 122 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 ZNF154Q13106 437 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 FDX2Q6P4F2 183 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 FBXL17Q9UF56 701 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 RABAC1Q9UI14 185 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 MED19A0JLT2 244 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 WDFY2Q96P53 400 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 WDR54Q9H977 334 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 VSIG4Q9Y279 399 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 PCMT1P22061 227 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 SMRP1Q8NCR6 262 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 DTD1Q8TEA8 209 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 FLRT3Q9NZU0 649 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 PRNDQ9UKY0 176 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
SFSWAP-203ENST00000535236 TMEM210A6NLX4 147 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 PRF1P14222 555 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 SSX1Q16384 188 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 MRM1Q6IN84 353 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 EIF4E3Q8N5X7 224 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 OR8D4Q8NGM9 314 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 OR10AC1Q8NH08 325 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 SLIRPQ9GZT3 109 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 KCNK15Q9H427 330 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 ECSCRQ19T08 205 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 FOXB2Q5VYV0 432 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 OR8I2Q8N0Y5 310 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 ZNF426Q9BUY5 554 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 SEC11CQ9BY50 192 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 C5orf67F2Z3F1 127 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 DNPH1O43598 174 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 LIFP15018 202 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 FBXW9Q5XUX1 488 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 SLC23A3Q6PIS1 610 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 ZNF596Q8TC21 504 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 HARBI1Q96MB7 349 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 TOLLIPQ9H0E2 274 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 LPAR3Q9UBY5 353 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 TAF1P21675 1872 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 IGHV3OR15-7A0A075B7D8 119 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 HLXQ14774 488 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 IQCJQ1A5X6 159 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 FAM78BQ5VT40 261 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 NUDT16L1Q9BRJ7 211 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 MANBALQ9NQG1 85 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 ANKRD20A5PA0PJZ0 165 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 GPR6P46095 362 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 NAAAQ02083 359 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 C1orf185Q5T7R7 199 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 VWA1Q6PCB0 445 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 PERPQ96FX8 193 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 TMEM38BQ9NVV0 291 aa15.97■□□□□ 0.15
SFSWAP-203ENST00000535236 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms