RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CLDN12P56749 244 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 RAB11BQ15907 218 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 COMMD2Q86X83 199 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 LDLRAD3Q86YD5 345 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 SEMA6DQ8NFY4 1073 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 GLYATL2Q8WU03 294 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 MRPL24Q96A35 216 aaKnown RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 SEC11CQ9BY50 192 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 MYEF2Q9P2K5 600 aaKnown RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 IQCF6A8MYZ5 107 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 F8VVB4 439 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 F8VWA3 439 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 SLC17A2O00624 439 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 RAB3DO95716 219 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 CD74P04233 296 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 ACKR3P25106 362 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 CD34P28906 385 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 APOBEC3AP31941 199 aaPredicted RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 ADIPOQQ15848 244 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 INO80EQ8NBZ0 244 aaPredicted RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 CSNK2A3Q8NEV1 391 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 NEUROG1Q92886 237 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 MMP26Q9NRE1 261 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 CISD1Q9NZ45 108 aaKnown RBP10.49□□□□□ -0.73
SCARB1-204ENST00000535005 PCDHB10Q9UN67 800 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 DHDHQ9UQ10 334 aa10.49□□□□□ -0.73
SCARB1-204ENST00000535005 CST4P01036 141 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 CD2P06729 351 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 TPT1P13693 172 aaKnown RBP10.48□□□□□ -0.73
SCARB1-204ENST00000535005 KLF3P57682 345 aaPredicted RBP10.48□□□□□ -0.73
SCARB1-204ENST00000535005 SELENOVP59797 346 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 EFNB3Q15768 340 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 VHLLQ6RSH7 139 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 ZDHHC22Q8N966 263 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 OR56B2PQ8NGI1 322 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 OR13C3Q8NGS6 347 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 THAP6Q8TBB0 222 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 TSEN15Q8WW01 171 aaKnown RBP10.48□□□□□ -0.73
SCARB1-204ENST00000535005 PIGTQ969N2 578 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 PTX4Q96A99 478 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 PRRT1Q99946 306 aa10.48□□□□□ -0.73
SCARB1-204ENST00000535005 MRPL37Q9BZE1 423 aaKnown RBP10.48□□□□□ -0.73
SCARB1-204ENST00000535005 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 A0A1B0GWJ7 208 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 LMX1BO60663 402 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 OR4A8P0C604 315 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 CD37P11049 281 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 BDKRB2P30411 391 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 SERPINF1P36955 418 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 MAGEB1P43366 347 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 TLE4Q04727 773 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 ALKBH6Q3KRA9 238 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 AWAT2Q6E213 333 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 LRP11Q86VZ4 500 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 SFT2D1Q8WV19 159 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 RNF141Q8WVD5 230 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 PP6455Q8WZ26 134 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 TMEM106AQ96A25 262 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 FGGYQ96C11 551 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
SCARB1-204ENST00000535005 C14orf79Q96F83 325 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 ZNF251Q9BRH9 671 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 CGGBP1Q9UFW8 167 aaPredicted RBP10.47□□□□□ -0.73
SCARB1-204ENST00000535005 DUSP13Q9UII6 198 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 FZR1Q9UM11 496 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 ZNF816-ZNF321PA0A0X1KG74 233 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 A0A1W2PPR1 153 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 OR2AT4A6NND4 320 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 H3BSH0 61 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 GPR31O00270 319 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 HS3ST1O14792 307 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 CD3DP04234 171 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 SOX2P48431 317 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 POU3F4P49335 361 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 PRSS12P56730 875 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 RAB5BP61020 215 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
SCARB1-204ENST00000535005 SWI5Q1ZZU3 235 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 FAM74A1Q5RGS3 127 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 ATPAF1Q5TC12 328 aaPredicted RBP10.47□□□□□ -0.73
SCARB1-204ENST00000535005 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 FAM166AQ6J272 317 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 LYG2Q86SG7 212 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 SAT2Q96F10 170 aaPredicted RBP10.47□□□□□ -0.73
SCARB1-204ENST00000535005 PLK3Q9H4B4 646 aa10.47□□□□□ -0.73
SCARB1-204ENST00000535005 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
SCARB1-204ENST00000535005 TEX13DA0A0J9YY54 714 aaPredicted RBP10.46□□□□□ -0.74
SCARB1-204ENST00000535005 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.74
SCARB1-204ENST00000535005 B9A039 149 aa10.46□□□□□ -0.74
SCARB1-204ENST00000535005 F5H0A9 414 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms