RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 MIEN1Q9BRT3 115 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 PARD6AQ9NPB6 346 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR14J1Q9UGF5 321 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 NPIPB11E5RHQ5 1161 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 REG1AP05451 166 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 PVRP15151 417 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 CEBPBP17676 345 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 GZMHP20718 246 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 GLRA1P23415 457 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 IL3RAP26951 378 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 CSN1S1P47710 185 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 CLDN17P56750 224 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 CLDN2P57739 230 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 NUTF2P61970 127 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 ARF1P84077 181 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 PAX5Q02548 391 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 FOXF1Q12946 379 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 FOXL1Q12952 345 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR10G9Q8NGN4 311 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR10G7Q8NGN6 311 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 RCC1LQ96I51 464 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 CCDC74BQ96LY2 380 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 HSD17B10Q99714 261 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 PRDM13Q9H4Q3 707 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZMAT3Q9HA38 289 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 FBXO34Q9NWN3 711 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 B3GALT1Q9Y5Z6 326 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 PHLPP1O60346 1717 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 IGKV3D-11A0A0A0MRZ8 115 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 TRBV6-6A0A0A6YYG2 114 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 RER1O15258 196 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 TRGC1P0CF51 173 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 DRD3P35462 400 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 CEACAM6P40199 344 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SSR4P51571 173 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MOGAT1Q96PD6 335 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 COMMD5Q9GZQ3 224 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 R3HDMLQ9H3Y0 253 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OBP2BQ9NPH6 170 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 FAM206AQ9NX38 181 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR6C3Q9NZP0 311 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 PRRT4C9JH25 899 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 H0YIZ8 118 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 PTGER4P35408 488 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 GALR1P47211 349 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SLC25A53Q5H9E4 307 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 H2BFWTQ7Z2G1 175 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZNF439Q8NDP4 499 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SLC25A28Q96A46 364 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZNF737O75373 536 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 TCTAP57738 103 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 LSM11P83369 360 aaKnown RBP eCLIP3.55□□□□□ -1.84
SOX6-217ENST00000533870 VAMP3Q15836 100 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 LRRC75BQ2VPJ9 315 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ARTNQ5T4W7 220 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZNF385CQ66K41 422 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZDHHC23Q8IYP9 409 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR10V1Q8NGI7 309 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 WDR77Q9BQA1 342 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 SOX7Q9BT81 388 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ULBP3Q9BZM4 244 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 WDR54Q9H977 334 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZFP30Q9Y2G7 519 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 DOT1LQ8TEK3 1739 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PR64 198 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PRV1 198 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LINC01549A6NIU2 74 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PRR19A6NJB7 356 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 M0R1X1 148 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMPRSS2O15393 492 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MOSPD3O75425 235 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 OR3A1P47881 315 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 ZNF121P58317 390 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 GABRA6Q16445 453 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 RASL11AQ6T310 242 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 CYB561D1Q8N8Q1 229 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 BOLLQ8N9W6 283 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 OR4A16Q8NH70 328 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LMX1AQ8TE12 382 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 STARD4Q96DR4 205 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 S1PR3Q99500 378 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 VPS25Q9BRG1 176 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 GAL3ST2Q9H3Q3 398 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 GLRX2Q9NS18 164 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM106BQ9NUM4 274 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TRAPPC2LQ9UL33 140 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SCN4AP35499 1836 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 THY1P04216 161 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 GCH1P30793 250 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 DSCR4P56555 118 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 UBE2G1P62253 170 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms