RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GPR148Q8TDV2 347 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TNFAIP8L1Q8WVP5 186 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 RGP1Q92546 391 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 MALSU1Q96EH3 234 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 JAM3Q9BX67 310 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TMEM133Q9H2Q1 129 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 GAL3ST2Q9H3Q3 398 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 SEBOXQ9HB31 216 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 CHCHD3Q9NX63 227 aaKnown RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 FBLN5Q9UBX5 448 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 FOXJ3Q9UPW0 622 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TCF19Q9Y242 345 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 UBE2J1Q9Y385 318 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-225ENST00000533704 TRRAPQ9Y4A5 3859 aa8.44□□□□□ -1.06
CAPN1-225ENST00000533704 VWFP04275 2813 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 A0A0G2JK05 382 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 IRGMA1A4Y4 181 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 ODAMA1E959 279 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 H0YJX3 145 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 SLC33A1O00400 549 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 GABRPO00591 440 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 KCNAB3O43448 404 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 HTR3BO95264 441 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 ERP29P30040 261 aaKnown RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 PTGFRP43088 359 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 GLP1RP43220 463 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 KIR2DS4P43632 304 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 MTNR1BP49286 362 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 DEFA6Q01524 100 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 HABP2Q14520 560 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 CDK5R1Q15078 307 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 RSU1Q15404 277 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 TTC23Q5W5X9 447 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 Q6P435 159 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 CRIP3Q6Q6R5 217 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 LIAT1Q6ZQX7 453 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 DHRSXQ8N5I4 330 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 KLHDC1Q8N7A1 406 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 ZFP41Q8N8Y5 198 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 CHST4Q8NCG5 386 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 SETD9Q8NE22 299 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 OR13C5Q8NGS8 318 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 HAVCR2Q8TDQ0 301 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 CPNE2Q96FN4 548 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 MMP27Q9H306 513 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 CLEC2DQ9UHP7 191 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 ING4Q9UNL4 249 aa8.43□□□□□ -1.06
CAPN1-225ENST00000533704 EXOSC1Q9Y3B2 195 aaKnown RBP8.43□□□□□ -1.06
CAPN1-225ENST00000533704 PNMA8CA0A1B0GUJ8 204 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 A6NDX4 124 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 H0YHG0 523 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 TOR1AO14656 332 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 ALX3O95076 343 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 CDRT1O95170 752 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 CSF1P09603 554 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 NFYBP25208 207 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 LMO1P25800 156 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 HTR1DP28221 377 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 GDNFP39905 211 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 OR3A4PP47883 348 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 EFNB2P52799 333 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 PPP3R1P63098 170 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 MED21Q13503 144 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 RBM39Q14498 530 aaKnown RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 HERPUD1Q15011 391 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 C2orf68Q2NKX9 166 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 CCDC58Q4VC31 144 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 DDI2Q5TDH0 399 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 OR52W1Q6IF63 320 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 CCBE1Q6UXH8 406 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 ABHD12Q8N2K0 398 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 PACRGLQ8N7B6 248 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 OR4D6Q8NGJ1 314 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 TMEM106AQ96A25 262 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 ORAI1Q96D31 301 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 COQ2Q96H96 371 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 TMEM80Q96HE8 168 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 OR5M11Q96RB7 305 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 RANBP3Q9H6Z4 567 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 RHOFQ9HBH0 211 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 PITPNC1Q9UKF7 332 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 SIRT4Q9Y6E7 314 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-225ENST00000533704 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
CAPN1-225ENST00000533704 PLXNB1O43157 2135 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 MEIKINA0A087WXM9 373 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 ANKRD65E5RJM6 399 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 PEX14O75381 377 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 LALBAP00709 142 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 CD24P25063 80 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 ADARB1P78563 741 aaKnown RBP8.41□□□□□ -1.06
CAPN1-225ENST00000533704 LTC4SQ16873 150 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 PIGYQ3MUY2 71 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 HEPN1Q6WQI6 88 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 LYG1Q8N1E2 194 aa8.41□□□□□ -1.06
CAPN1-225ENST00000533704 PXT1Q8NFP0 134 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms