RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 HERV-K104P61576 105 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 ZNF169Q14929 603 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-215ENST00000533476 ZNF585AQ6P3V2 769 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 FAM219AQ8IW50 185 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 SUMF1Q8NBK3 374 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 CLRN3Q8NCR9 226 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 PRELID1Q9Y255 219 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 MPC1Q9Y5U8 109 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 ANKRD30BLA7E2S9 258 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 DEDDO75618 318 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 NAPSAO96009 420 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 AADACP22760 399 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 TNFSF10P50591 281 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 EIF5AL1Q6IS14 154 aaKnown RBP16.53■□□□□ 0.24
UBXN1-215ENST00000533476 MDP1Q86V88 176 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 SVBPQ8N300 66 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 OR5L1Q8NGL2 311 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 SYT3Q9BQG1 590 aa16.53■□□□□ 0.24
UBXN1-215ENST00000533476 CARHSP1Q9Y2V2 147 aaKnown RBP16.53■□□□□ 0.24
UBXN1-215ENST00000533476 OR5B21A6NL26 309 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 HKR1P10072 659 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 SMCO1Q147U7 214 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 PHLDA2Q53GA4 152 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 TMPRSS7Q7RTY8 843 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 LINC00596Q86U02 117 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 CCDC71LQ8N9Z2 235 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 NARS2Q96I59 477 aaKnown RBP16.52■□□□□ 0.23
UBXN1-215ENST00000533476 HS3ST6Q96QI5 342 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 Q9N2K0 584 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 PURGQ9UJV8 347 aaKnown RBP16.52■□□□□ 0.23
UBXN1-215ENST00000533476 PCNX2A6NKB5 2137 aa16.52■□□□□ 0.23
UBXN1-215ENST00000533476 PPYP01298 95 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 H2AFB1P0C5Y9 115 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 SP6Q3SY56 376 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 GMPPAQ96IJ6 420 aaPredicted RBP16.51■□□□□ 0.23
UBXN1-215ENST00000533476 C18orf12Q96KH6 178 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 PLK3Q9H4B4 646 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 ATP6V1G2-DDX39BF2Z307 99 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 H7C1Q1 480 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 NUPL2O15504 423 aaKnown RBP16.51■□□□□ 0.23
UBXN1-215ENST00000533476 SYNGR1O43759 233 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 IGSF11Q5DX21 431 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 ZNF573Q86YE8 665 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 TMED6Q8WW62 240 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 TSNAXQ99598 290 aaKnown RBP16.51■□□□□ 0.23
UBXN1-215ENST00000533476 PRRX2Q99811 253 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 IL36RNQ9UBH0 155 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 LPAR3Q9UBY5 353 aa16.51■□□□□ 0.23
UBXN1-215ENST00000533476 J3QW42 95 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 GNG3P63215 75 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 PJVKQ0ZLH3 352 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 MST1LQ2TV78 715 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 FAM185AQ8N0U4 392 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 LGI3Q8N145 548 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 MSI2Q96DH6 328 aaKnown RBP16.5■□□□□ 0.23
UBXN1-215ENST00000533476 SMIM8Q96KF7 97 aa16.5■□□□□ 0.23
UBXN1-215ENST00000533476 FAM74A7A6NL05 159 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 K7EPK0 472 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 LILRA1O75019 489 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 RPL12P30050 165 aaKnown RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 PMP22Q01453 160 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 FAM74A3Q4VXF1 159 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 HAGHLQ6PII5 290 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 VASH2Q86V25 355 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 FAM71E2Q8N5Q1 922 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 OR11L1Q8NGX0 322 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 GLYATL2Q8WU03 294 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 GTF3AQ92664 365 aaKnown RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 PKIBQ9C010 78 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 SPACA1Q9HBV2 294 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 GLRX2Q9NS18 164 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 PTPRZ1P23471 2315 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 ZNF292O60281 2723 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 LRP3O75074 770 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 TSPAN9O75954 239 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 IGHG3P01860 377 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 GAPDHP04406 335 aaKnown RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 PRKACAP17612 351 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 IL24Q13007 206 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 TBC1D28Q2M2D7 210 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 P4HA3Q7Z4N8 544 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 DEFB124Q8NES8 71 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 CLCF1Q9UBD9 225 aa16.49■□□□□ 0.23
UBXN1-215ENST00000533476 FBXO9Q9UK97 447 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-215ENST00000533476 KIR2DS1A0A191URI9 304 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 NKX2-8O15522 239 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 DIRAS3O95661 229 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 KIR2DS4P43632 304 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 IL13RA2Q14627 380 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 KIR2DS1Q14954 304 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 OR2A2Q6IF42 318 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 LYZL2Q7Z4W2 148 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 SEC11CQ9BY50 192 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 RIMS4Q9H426 269 aaPredicted RBP16.48■□□□□ 0.23
UBXN1-215ENST00000533476 PLEKHA2Q9HB19 425 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 PARD6AQ9NPB6 346 aa16.48■□□□□ 0.23
UBXN1-215ENST00000533476 ASCL3Q9NQ33 180 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms