RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 HTR1DP28221 377 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 DEFA6Q01524 100 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 PLA1AQ53H76 456 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 TMPRSS11AQ6ZMR5 421 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 GPR148Q8TDV2 347 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 CFHR4Q92496 578 aa18.91■□□□□ 0.62
SMPD1-209ENST00000533196 SLC33A1O00400 549 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-209ENST00000533196 DEGS1O15121 323 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 CSF1P09603 554 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 RAB13P51153 203 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 AESQ08117 197 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 CDK5R1Q15078 307 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 TTC23Q5W5X9 447 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 KLHDC1Q8N7A1 406 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 OR4P4Q8NGL7 312 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 NDNFQ8TB73 568 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 ZNF596Q8TC21 504 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 NCOR1P1Q9H4R4 102 aa18.9■□□□□ 0.62
SMPD1-209ENST00000533196 ODAMA1E959 279 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 F2RL2O00254 374 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 ALDOBP05062 364 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 CD34P28906 385 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 GLIPR1P48060 266 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 GTF2A1P52655 376 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-209ENST00000533196 BDH1Q02338 343 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 SLC34A1Q06495 639 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 SCN1BQ07699 218 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 IL13RA2Q14627 380 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 SMN1Q16637 294 aaKnown RBP18.89■□□□□ 0.61
SMPD1-209ENST00000533196 KRBOX4Q5JUW0 171 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 CCBE1Q6UXH8 406 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-209ENST00000533196 ABHD12Q8N2K0 398 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 PACRGLQ8N7B6 248 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 SETD9Q8NE22 299 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 OR51T1Q8NGJ9 327 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 CREB3L1Q96BA8 519 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 NKX3-1Q99801 234 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-209ENST00000533196 PRSS22Q9GZN4 317 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 ZNF702PQ9H963 129 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 OR6C3Q9NZP0 311 aa18.89■□□□□ 0.61
SMPD1-209ENST00000533196 DIMT1Q9UNQ2 313 aaKnown RBP18.89■□□□□ 0.61
SMPD1-209ENST00000533196 ZNF729A6NN14 1252 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-209ENST00000533196 FAM90A22PA8MWA6 464 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 MMP23AO75900 390 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 TSPAN15O95858 294 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 CDK2P24941 298 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 PTGFRP43088 359 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 ARHGDIBP52566 201 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 MED21Q13503 144 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 Q8NFD4 153 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 RGP1Q92546 391 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-209ENST00000533196 COQ2Q96H96 371 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 GPER1Q99527 375 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 DPM3Q9P2X0 92 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 EXOSC1Q9Y3B2 195 aaKnown RBP18.88■□□□□ 0.61
SMPD1-209ENST00000533196 HILPDAQ9Y5L2 63 aa18.88■□□□□ 0.61
SMPD1-209ENST00000533196 A0A087X0M5 115 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 A0A1B0GX30 115 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 GABRPO00591 440 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 MYL12AP19105 171 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 ETV1P50549 477 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 PDLIM3Q53GG5 364 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-209ENST00000533196 PRAMEF5Q5TYX0 476 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 ASCL4Q6XD76 172 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 OR4D6Q8NGJ1 314 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 TNFAIP8L1Q8WVP5 186 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 SERTAD4Q9NUC0 356 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 FOXJ3Q9UPW0 622 aa18.87■□□□□ 0.61
SMPD1-209ENST00000533196 LEUTXA8MZ59 168 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 H0YJX3 145 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 OGG1O15527 345 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 IGLV1-47P01700 117 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 SOX2P48431 317 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 KCNJ3P48549 501 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 PAX5Q02548 391 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 C16orf82Q7Z2V1 217 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 TMEM219Q86XT9 240 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 CNIH3Q8TBE1 160 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 TMEM106AQ96A25 262 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 SMIM19Q96E16 107 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 CHCHD3Q9NX63 227 aaKnown RBP18.86■□□□□ 0.61
SMPD1-209ENST00000533196 BABAM2Q9NXR7 383 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 TAS2R4Q9NYW5 299 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 ZNF281Q9Y2X9 895 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 HSPE1-MOB4S4R3N1 261 aa18.86■□□□□ 0.61
SMPD1-209ENST00000533196 VSIG10L2P0DP72 767 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 BRS3P32247 399 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 CEACAM3P40198 252 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 ATXN7L3Q14CW9 347 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-209ENST00000533196 RSU1Q15404 277 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 OR2G6Q5TZ20 316 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 XAF1Q6GPH4 301 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 SATL1Q86VE3 508 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 ZNF565Q8N9K5 539 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 OR51A2Q8NGJ7 313 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 BARHL1Q9BZE3 327 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 TMEM138Q9NPI0 162 aa18.85■□□□□ 0.61
SMPD1-209ENST00000533196 KBTBD11-OT1A0A1B0GTJ5 212 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 PRRX1P54821 245 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 PPP3R1P63098 170 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms