RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 Q6P435 159 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 BTNL3Q6UXE8 466 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 GDPD3Q7L5L3 318 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM104Q8NE00 496 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR51D1Q8NGF3 324 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 H1FXQ92522 213 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM46BQ96A09 425 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAHD2AQ96GK7 314 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 URM1Q9BTM9 101 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SLIRPQ9GZT3 109 aaKnown RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 SHARPINQ9H0F6 387 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 GSX1Q9H4S2 264 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 MMP26Q9NRE1 261 aa9.32□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A0G2JMP0 313 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A0X1KG70 313 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM82A0PJX8 343 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 FUOMA2VDF0 154 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 A8MV72 311 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 ENSAO43768 121 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM127O75204 238 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 FCN3O75636 299 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 CLEC2LP0C7M8 214 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 RPS19P39019 145 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 GRK1Q15835 563 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM189A2Q15884 450 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 ATAD3CQ5T2N8 411 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 DCAF12L2Q5VW00 463 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 SFXN4Q6P4A7 337 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 C17orf107Q6ZR85 190 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR2W3Q7Z3T1 314 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR8H2Q8N162 312 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR4M2Q8NGB6 313 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 NUDT16L1Q9BRJ7 211 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 DCTN5Q9BTE1 182 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM59Q9BXS4 323 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 C6orf62Q9GZU0 229 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 NXF2Q9GZY0 626 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 SPACA1Q9HBV2 294 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 AKIP1Q9NQ31 210 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 DAPK2Q9UIK4 370 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 INSIG2Q9Y5U4 225 aa9.31□□□□□ -0.92
TRAPPC4-211ENST00000533012 TRBV23-1A0A0A0MS06 115 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 TRAV24A0A0B4J272 114 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A1W2PPH5 198 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 J3QLI3 93 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 SLC33A1O00400 549 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 MGST3O14880 152 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PSPNO60542 156 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 SLC2A2P11168 524 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 TGFBR1P36897 503 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PPP5CP53041 499 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 EDDM3BP56851 147 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 QRFPP83859 136 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PAX2Q02962 417 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PAN3Q58A45 887 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 IDNKQ5T6J7 187 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 LY6G5BQ8NDX9 201 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR4S1Q8NGB4 309 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 Q96M66 194 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 DMRTB1Q96MA1 342 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 MRI1Q9BV20 369 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 BARHL1Q9BZE3 327 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 C7orf69Q9H7B7 122 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 FBLN5Q9UBX5 448 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 ADAM30Q9UKF2 790 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 RAB22AQ9UL26 194 aa9.3□□□□□ -0.92
TRAPPC4-211ENST00000533012 HIVEP1P15822 2718 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM272A0A1B0GTI8 110 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A1W2PQ09 198 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 C22orf46C9J442 243 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 MCRIP1C9JLW8 97 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 HSPB6O14558 160 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms