RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GABRA5P31644 462 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 GLIPR1P48060 266 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 RAB13P51153 203 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 KRTAP10-3P60369 221 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 PPP3R1P63098 170 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 RSU1Q15404 277 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 KRBOX4Q5JUW0 171 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 OGFRL1Q5TC84 451 aaPredicted RBP13.95□□□□□ -0.18
PHRF1-204ENST00000532550 ELP2Q6IA86 826 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 OR52W1Q6IF63 320 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 LIAT1Q6ZQX7 453 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 DTX3Q8N9I9 347 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 OR51A2Q8NGJ7 313 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 OR52N1Q8NH53 320 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 PIFOQ8TCI5 191 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 RPS4Y2Q8TD47 263 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 CORO2AQ92828 525 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 SMIM19Q96E16 107 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 FAM192AQ9GZU8 254 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 VCXQ9H320 206 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 ING3Q9NXR8 418 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 TAS2R3Q9NYW6 316 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 IGHV2-26A0A0B4J1V2 119 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 ANKRD65E5RJM6 399 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 GABRPO00591 440 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 CASQ2O14958 399 aaPredicted RBP13.94□□□□□ -0.18
PHRF1-204ENST00000532550 CSN2P05814 226 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 KIR2DS4P43632 304 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 MINOS1Q5TGZ0 78 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 ASPHD2Q6ICH7 369 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 OR4C13Q8NGP0 309 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 NDNFQ8TB73 568 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 GHSRQ92847 366 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 S100A13Q99584 98 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 CLEC7AQ9BXN2 247 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 TMEM138Q9NPI0 162 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 ING4Q9UNL4 249 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 MINOS1-NBL1R4GNA1 71 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
PHRF1-204ENST00000532550 ODAMA1E959 279 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 H0YJX3 145 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 H3BUI4 141 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 MMP23AO75900 390 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 HTR3BO95264 441 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 LALBAP00709 142 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 GNAO1P09471 354 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 ZNF93P35789 620 aaPredicted RBP13.93□□□□□ -0.18
PHRF1-204ENST00000532550 PTGFRP43088 359 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 DMKNQ6E0U4 476 aaPredicted RBP13.93□□□□□ -0.18
PHRF1-204ENST00000532550 HEPN1Q6WQI6 88 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 RTN4RL2Q86UN3 420 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 ABHD12Q8N2K0 398 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 STX19Q8N4C7 294 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 OR51T1Q8NGJ9 327 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 NKX3-1Q99801 234 aaPredicted RBP13.93□□□□□ -0.18
PHRF1-204ENST00000532550 CDCA4Q9BXL8 241 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 BARHL1Q9BZE3 327 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 NPFFR1Q9GZQ6 430 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 DCLRE1BQ9H816 532 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 CNOT2Q9NZN8 540 aaKnown RBP13.93□□□□□ -0.18
PHRF1-204ENST00000532550 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 HILPDAQ9Y5L2 63 aa13.93□□□□□ -0.18
PHRF1-204ENST00000532550 CDK2P24941 298 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 HTR1DP28221 377 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 BDKRB2P30411 391 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 SLC34A1Q06495 639 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 IL13RA2Q14627 380 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 ATXN7L3Q14CW9 347 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-204ENST00000532550 PAN3Q58A45 887 aaKnown RBP13.92□□□□□ -0.18
PHRF1-204ENST00000532550 YIF1BQ5BJH7 314 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 LDLRAD2Q5SZI1 272 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 DDI2Q5TDH0 399 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 PRAMEF5Q5TYX0 476 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 C11orf88Q6PI97 169 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 ASCL4Q6XD76 172 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 ZNF565Q8N9K5 539 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 BPIFB6Q8NFQ5 453 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 OR4D6Q8NGJ1 314 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 OR10K1Q8NGX5 313 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 OR2T6Q8NHC8 308 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 METTL9Q9H1A3 318 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 RANBP3Q9H6Z4 567 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-204ENST00000532550 PLCXD1Q9NUJ7 323 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 OR6C3Q9NZP0 311 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 CKLFQ9UBR5 152 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 TCF19Q9Y242 345 aa13.92□□□□□ -0.18
PHRF1-204ENST00000532550 HSPB6O14558 160 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 TOR1AO14656 332 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 XPNPEP2O43895 674 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 CDRT1O95170 752 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 CSTBP04080 98 aaKnown RBP13.91□□□□□ -0.18
PHRF1-204ENST00000532550 OR3A4PP47883 348 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 DYNLT3P51808 116 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 TAS2R43P59537 309 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 RIPK1Q13546 671 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 Q499Y3 187 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 ZFP41Q8N8Y5 198 aa13.91□□□□□ -0.18
PHRF1-204ENST00000532550 ZNF485Q8NCK3 441 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms