RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZFPL1O95159 310 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 CYB5AP00167 134 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 RBP4P02753 201 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 OCM2P0CE71 109 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 OCMP0CE72 109 aaPredicted RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 FCGR1AP12314 374 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 MPZP25189 248 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 PEX2P28328 305 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 FUT6P51993 359 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 ISL1P61371 349 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 MEF2CQ06413 473 aaPredicted RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 RBM39Q14498 530 aaKnown RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 GRK1Q15835 563 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 ZIK1Q3SY52 487 aaPredicted RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 ZBTB49Q6ZSB9 765 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 Q6ZSR3 168 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 TRAPPC6BQ86SZ2 158 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 GID4Q8IVV7 300 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 OR8H2Q8N162 312 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 CBR4Q8N4T8 237 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 OR10H4Q8NGA5 316 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 EMG1Q92979 244 aaKnown RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 LEAP2Q969E1 77 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 BORCS8Q96FH0 119 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 HRASLS5Q96KN8 279 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 SNX22Q96L94 193 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 MCRIP2Q9BUT9 160 aaKnown RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 CLN6Q9NWW5 311 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 GLS2Q9UI32 602 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 TNCP24821 2201 aa7.04□□□□□ -1.28
USF1-210ENST00000531842 PLECQ15149 4684 aaKnown RBP7.04□□□□□ -1.28
USF1-210ENST00000531842 A0A1W2PQL4 384 aaPredicted RBP7.03□□□□□ -1.28
USF1-210ENST00000531842 SERPINE3A8MV23 424 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 EBAG9O00559 213 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 RAMP3O60896 148 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ENTPD6O75354 484 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 HAND1O96004 215 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 CDK2P24941 298 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 HTR1FP30939 366 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 NPBWR2P48146 333 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 POU3F4P49335 361 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ALDH3A2P51648 485 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ATP1B3P54709 279 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 MTCP1P56278 107 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ZNF85Q03923 595 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 IL18R1Q13478 541 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 DCTN2Q13561 401 aaKnown RBP7.03□□□□□ -1.28
USF1-210ENST00000531842 UBE2V2Q15819 145 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ZNF260Q3ZCT1 412 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 SLC25A30Q5SVS4 291 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ZFP1Q6P2D0 407 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ENTHD1Q8IYW4 607 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 OR56B4Q8NH76 319 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 AKR1E2Q96JD6 320 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 DCLRE1BQ9H816 532 aa7.03□□□□□ -1.28
USF1-210ENST00000531842 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
USF1-210ENST00000531842 METTL15A6NJ78 407 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 ANKRD65E5RJM6 399 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 LY6LH3BQJ8 138 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 BUB1B-PAK6H3BSN5 160 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 SIRPB1O00241 398 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 OR2T7P0C7T2 308 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 FRMD6-AS1P0C7T7 363 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 ZNF20P17024 532 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 PRKACAP17612 351 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 CCL1P22362 96 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 CHATP28329 748 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 BRS3P32247 399 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 OR3A1P47881 315 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 GLIPR1P48060 266 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 RBP2P50120 134 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 ARHGDIBP52566 201 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 SNRPGP62308 76 aaKnown RBP7.02□□□□□ -1.29
USF1-210ENST00000531842 BDH1Q02338 343 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 SCN1BQ07699 218 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 DOC2BQ14184 412 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 C9orf66Q5T8R8 295 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 FAM220AQ7Z4H9 259 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 CATSPERDQ86XM0 798 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 Q8IYB0 196 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 RDH10Q8IZV5 341 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 FAM58AQ8N1B3 248 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 PQLC1Q8N2U9 271 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 PRSS35Q8N3Z0 413 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 DRAM1Q8N682 238 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 CCDC54Q8NEL0 328 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 OR8J1Q8NGP2 316 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 APH1BQ8WW43 257 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 RBFOX1Q9NWB1 397 aaKnown RBP7.02□□□□□ -1.29
USF1-210ENST00000531842 WARS2Q9UGM6 360 aaKnown RBP7.02□□□□□ -1.29
USF1-210ENST00000531842 GNG8Q9UK08 70 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 MOB4Q9Y3A3 225 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 LINC00312Q9Y6C7 94 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 HSPE1-MOB4S4R3N1 261 aa7.02□□□□□ -1.29
USF1-210ENST00000531842 TRGV10A0A0A0MS01 117 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 IGHV3-72A0A0B4J1Y9 119 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms