RNA–Protein interactions for RNA: ENST00000531052.1

CDKL1-208, Transcript of cyclin dependent kinase like 1, human

TSL 3

Gene CDKL1, Length 704 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKL1-208	ENST00000531052	ACTA1	P68133	377 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	ZNF85	Q03923	595 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	SLC34A1	Q06495	639 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	DYNC1I2	Q13409	638 aa	Known RBP	4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	IL18R1	Q13478	541 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	GRK1	Q15835	563 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	TMEM95	Q3KNT9	176 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	TMEM244	Q5VVB8	128 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052		Q6ZPA2	131 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	ZBTB49	Q6ZSB9	765 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	UTS2B	Q765I0	119 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	C16orf82	Q7Z2V1	217 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	FAM220A	Q7Z4H9	259 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	AMIGO2	Q86SJ2	522 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	EGFL6	Q8IUX8	553 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	FAM58A	Q8N1B3	248 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	LYG1	Q8N1E2	194 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	PRSS35	Q8N3Z0	413 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	ZNF676	Q8N7Q3	588 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	TPRX1	Q8N7U7	411 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR52N4	Q8NGI2	321 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR4P4	Q8NGL7	312 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR8J1	Q8NGP2	316 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	NDNF	Q8TB73	568 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	BCAS4	Q8TDM0	211 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	PP6455	Q8WZ26	134 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	R3HDM4	Q96D70	268 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	C20orf173	Q96LM9	149 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	CIB1	Q99828	191 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	CITED2	Q99967	270 aa	Predicted RBP	4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	CLEC7A	Q9BXN2	247 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	GABARAPL3	Q9BY60	117 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	CHST6	Q9GZX3	395 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	MMP28	Q9H239	520 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	TMEM133	Q9H2Q1	129 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	RBFOX1	Q9NWB1	397 aa	Known RBP	4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	IL36RN	Q9UBH0	155 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	HILPDA	Q9Y5L2	63 aa		4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.58	□□□□□ -1.68
CDKL1-208	ENST00000531052	IGKV1-9	A0A0C4DH69	117 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	FUOM	A2VDF0	154 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	MMP23A	O75900	390 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	INMT	O95050	263 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	PRB2	P02812	416 aa	Predicted RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	PRKACA	P17612	351 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	ATF1	P18846	271 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	BCL3	P20749	454 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	PRKACB	P22694	351 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	HTR1D	P28221	377 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	CD34	P28906	385 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	ATP6V1E1	P36543	226 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	POLR2I	P36954	125 aa	Known RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR3A1	P47881	315 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	NPBWR2	P48146	333 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	P2RX3	P56373	397 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	CDC42	P60953	191 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	BLCAP	P62952	87 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	BNIP1	Q12981	228 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	TP53I3	Q53FA7	332 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	SPIN3	Q5JUX0	258 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR52W1	Q6IF63	320 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	TRAPPC6B	Q86SZ2	158 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	RTN4RL2	Q86UN3	420 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	STPG3	Q8N7X2	389 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR2G2	Q8NGZ5	317 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	ZNF596	Q8TC21	504 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	MRAP	Q8TCY5	172 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	RFK	Q969G6	155 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	EME1	Q96AY2	570 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	PHF21A	Q96BD5	680 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	SPSB1	Q96BD6	273 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	ADAT3	Q96EY9	351 aa	Predicted RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	AKR1E2	Q96JD6	320 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OPALIN	Q96PE5	141 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR5M11	Q96RB7	305 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	MBOAT4	Q96T53	435 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	COMMD4	Q9H0A8	199 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	GAL3ST2	Q9H3Q3	398 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	RIBC2	Q9H4K1	309 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	IFT22	Q9H7X7	185 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	HMG20A	Q9NP66	347 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	EXOSC4	Q9NPD3	245 aa	Known RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	NECAP2	Q9NVZ3	263 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	DPM3	Q9P2X0	92 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	GLS2	Q9UI32	602 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	GNG8	Q9UK08	70 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	OAZ3	Q9UMX2	235 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	AP4S1	Q9Y587	144 aa		4.57	□□□□□ -1.68
CDKL1-208	ENST00000531052	TRGV10	A0A0A0MS01	117 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	IGKV1-12	A0A0C4DH73	117 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052		H3BUI4	141 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	SIRPB1	O00241	398 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	KDM4B	O94953	1096 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR2F2	O95006	317 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	OR2H2	O95918	312 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	IGKV1D-12	P01611	117 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	IGLV1-47	P01700	117 aa		4.56	□□□□□ -1.68
CDKL1-208	ENST00000531052	MT-ND2	P03891	347 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms