RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 STOML3Q8TAV4 291 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 OR5P3Q8WZ94 311 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TMEM230Q96A57 120 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 MOB3AQ96BX8 217 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 WBP1Q96G27 269 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ABHD14BQ96IU4 210 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 MICU1Q9BPX6 476 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ZNF2Q9BSG1 426 aaPredicted RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 RTL8AQ9BWD3 113 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 FN3KRPQ9HA64 309 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 AP5S1Q9NUS5 200 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 GFOD1Q9NXC2 390 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TREM2Q9NZC2 230 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 PFDN2Q9UHV9 154 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 AK3Q9UIJ7 227 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 POLDIP2Q9Y2S7 368 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 STARD10Q9Y365 291 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 BDP1A6H8Y1 2624 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ZNF318Q5VUA4 2279 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ARHGAP21Q5T5U3 1957 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 MYO7BQ6PIF6 2116 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 CACNA1GO43497 2377 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 IGKV1-12A0A0C4DH73 117 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 TMEM210A6NLX4 147 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 KRBOX1C9JBD0 128 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 GEMIN2O14893 280 aaKnown RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 SHOXO15266 292 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SPRY1O43609 319 aaPredicted RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 ANGPTL7O43827 346 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 IL18BPO95998 194 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 NAPSAO96009 420 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 IGKV1D-12P01611 117 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 IGHV3-9P01782 118 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 RLN2P04090 185 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 TK1P04183 234 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SFTPBP07988 381 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 HOXD4P09016 255 aaPredicted RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 WNT2P09544 360 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 CBR1P16152 277 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ZNF14P17017 642 aaPredicted RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 COX5AP20674 150 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SERPINF1P36955 418 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 NBL1P41271 181 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 P2RX3P56373 397 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 HERV-K104P61576 105 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 MZT1Q08AG7 82 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 DNAH14Q0VDD8 3507 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SMCO1Q147U7 214 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 P2RY6Q15077 328 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 TGIF1Q15583 401 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 C3orf36Q3SXR2 165 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ABCA11PQ4W5N1 156 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SPIN3Q5JUX0 258 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 C6orf183Q5T699 404 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 FIP1L1Q6UN15 594 aaKnown RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 C17orf107Q6ZR85 190 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SSX8Q7RTT4 187 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 HSD17B13Q7Z5P4 300 aaPredicted RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 CNTRLQ7Z7A1 2325 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 COMMD7Q86VX2 200 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ZADH2Q8N4Q0 377 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SPERTQ8NA61 448 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ADAD2Q8NCV1 583 aaKnown RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 CASTOR1Q8WTX7 329 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 FAM216AQ8WUB2 273 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 HPSE2Q8WWQ2 592 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ST8SIA2Q92186 375 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ZNF75AQ96N20 296 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 AQP10Q96PS8 301 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ARPC5LQ9BPX5 153 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SULT4A1Q9BR01 284 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 FAAP24Q9BTP7 215 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SHARPINQ9H0F6 387 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 DEFB127Q9H1M4 99 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 ZNF442Q9H7R0 627 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 METTL8Q9H825 291 aaKnown RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 PLEKHA2Q9HB19 425 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 CDH20Q9HBT6 801 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 TMEM165Q9HC07 324 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 PRR13Q9NZ81 148 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 SPRR3Q9UBC9 169 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 TUBD1Q9UJT1 453 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 FBXO9Q9UK97 447 aaPredicted RBP4.76□□□□□ -1.65
PCF11-205ENST00000530906 NUP50Q9UKX7 468 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 LIPGQ9Y5X9 500 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 LAMA1P25391 3075 aa4.76□□□□□ -1.65
PCF11-205ENST00000530906 OTOGLQ3ZCN5 2332 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 MED13Q9UHV7 2174 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 CACNA1HO95180 2353 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 SPAARA0A1B0GVQ0 90 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 A6NL46 340 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 FAM25EA8MYX2 175 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 IQCF6A8MYZ5 107 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 ZNF732B4DXR9 585 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 NPIPB11E5RHQ5 1161 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 F8VVB4 439 aa4.75□□□□□ -1.65
PCF11-205ENST00000530906 F8VWA3 439 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms