RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
TTC39A-216ENST00000530004 C1orf123Q9NWV4 160 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
TTC39A-216ENST00000530004 H3BUI4 141 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 HSPB6O14558 160 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 TPD52L2O43399 206 aaKnown RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 DTYMKP23919 212 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 RAG2P55895 527 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SNRPD2P62316 118 aaKnown RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SCGB2B2Q4G0G5 96 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 MEGF10Q96KG7 1140 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SCP2D1Q9UJQ7 156 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 WNT9BO14905 357 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 DEGS1O15121 323 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 IFNA6P05013 189 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 FCGR3AP08637 254 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 ZNF44P15621 663 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 HOXA4Q00056 320 aaPredicted RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
TTC39A-216ENST00000530004 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 SUMF2Q8NBJ7 301 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 OR5H2Q8NGV7 314 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 NEK7Q8TDX7 302 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 CHST6Q9GZX3 395 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 DYNLRB1Q9NP97 96 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 EDARQ9UNE0 448 aa12.13□□□□□ -0.47
TTC39A-216ENST00000530004 TRAV24A0A0B4J272 114 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 PEX14O75381 377 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 IGHV1-46P01743 117 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 GLRA1P23415 457 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 TAS2R46P59540 309 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 ZNF146Q15072 292 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 Q6P435 159 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 ITLN1Q8WWA0 313 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 GIMAP1Q8WWP7 306 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 PRRT1Q99946 306 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 BEX2Q9BXY8 128 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 WDR13Q9H1Z4 485 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 LIME1Q9H400 295 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 BEX1Q9HBH7 125 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 SLC2A8Q9NY64 477 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 FBXO9Q9UK97 447 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-216ENST00000530004 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
TTC39A-216ENST00000530004 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
TTC39A-216ENST00000530004 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 C17orf100A8MU93 164 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 OR2H2O95918 312 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 TNFSF4P23510 183 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 OR3A3P47888 321 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 TNFAIP6P98066 277 aaPredicted RBP12.11□□□□□ -0.47
TTC39A-216ENST00000530004 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 SPIN3Q5JUX0 258 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 MOGAT3Q86VF5 341 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
TTC39A-216ENST00000530004 OR5AP2Q8NGF4 316 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 NRGNQ92686 78 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 RDH5Q92781 318 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
TTC39A-216ENST00000530004 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 CHMP1AQ9HD42 196 aaPredicted RBP12.11□□□□□ -0.47
TTC39A-216ENST00000530004 IL19Q9UHD0 177 aa12.11□□□□□ -0.47
TTC39A-216ENST00000530004 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 SIRPB1O00241 398 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 SH2D1BO14796 132 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 RBMXP38159 391 aaKnown RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 PPOXP50336 477 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ACP7Q6ZNF0 438 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 HPS1Q92902 700 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 SLC25A21Q9BQT8 299 aaPredicted RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 OR14J1Q9UGF5 321 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ANXA10Q9UJ72 324 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 HAND1O96004 215 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 RLN1P04808 185 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 GLAP06280 429 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ADH4P08319 380 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 GATA4P43694 442 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ARPC4P59998 168 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms