RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 PMP2P02689 132 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 IRF2P14316 349 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 MICBQ29980 383 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 BTN2A1Q7KYR7 527 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 OR5H2Q8NGV7 314 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 HPS1Q92902 700 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 DNAJB11Q9UBS4 358 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 CHD3Q12873 2000 aaKnown RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 ZNF462Q96JM2 2506 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 TRAV6A0A075B6T7 132 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 IFNL4K9M1U5 179 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 NAPSAO96009 420 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 IFNA6P05013 189 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 CSN2P05814 226 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 ZNF735P0CB33 412 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 MDH2P40926 338 aaKnown RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 RBMS2Q15434 407 aaKnown RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 CHRFAM7AQ494W8 412 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 VAX1Q5SQQ9 334 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 SHEQ5VZ18 495 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 MEX3BQ6ZN04 569 aaKnown RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 SLC6A7Q99884 636 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 C20orf85Q9H1P6 137 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 RIMS4Q9H426 269 aaPredicted RBP13.98□□□□□ -0.17
PACS1-209ENST00000529757 SCP2D1Q9UJQ7 156 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 ICE1Q9Y2F5 2266 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 WIPI2Q9Y4P8 454 aa13.98□□□□□ -0.17
PACS1-209ENST00000529757 FUOMA2VDF0 154 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 RFPL4AA6NLU0 287 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 LRRC30A6NM36 301 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 RFPL4AL1F8VTS6 287 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 NDUFB6O95139 128 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 LMO1P25800 156 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 RBMXP38159 391 aaKnown RBP13.97□□□□□ -0.17
PACS1-209ENST00000529757 OR3A3P47888 321 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 BCAP31P51572 246 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 BTG1P62324 171 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 ZMYND11Q15326 602 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 OR5AP2Q8NGF4 316 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 PRRT1Q99946 306 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 SEBOXQ9HB31 216 aaPredicted RBP13.97□□□□□ -0.17
PACS1-209ENST00000529757 ZNF286AQ9HBT8 521 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 ANXA10Q9UJ72 324 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 FBXO9Q9UK97 447 aaPredicted RBP13.97□□□□□ -0.17
PACS1-209ENST00000529757 ROS1P08922 2347 aa13.97□□□□□ -0.17
PACS1-209ENST00000529757 IGKV1D-8A0A087WSZ0 117 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 OR2AT4A6NND4 320 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 PYCARD-AS1I3L0S3 204 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 CYB5R3P00387 301 aaPredicted RBP13.96□□□□□ -0.17
PACS1-209ENST00000529757 H2AFB2P0C5Z0 115 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 PSG2P11465 335 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 CD80P33681 288 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 ARPC4P59998 168 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 IDO2Q6ZQW0 420 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 GINS4Q9BRT9 223 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 PPA2Q9H2U2 334 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 TMEM165Q9HC07 324 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 SLC2A8Q9NY64 477 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 TREM2Q9NZC2 230 aa13.96□□□□□ -0.17
PACS1-209ENST00000529757 KLF2Q9Y5W3 355 aaPredicted RBP13.96□□□□□ -0.17
PACS1-209ENST00000529757 KMT2BQ9UMN6 2715 aaPredicted RBP13.95□□□□□ -0.18
PACS1-209ENST00000529757 IGHV3OR15-7A0A075B7D8 119 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 H7C1Q1 480 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 RNF224P0DH78 156 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 PRDX2P32119 198 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 PPOXP50336 477 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 RAG2P55895 527 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 RAB25P57735 213 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 COL10A1Q03692 680 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 SRSF7Q16629 238 aaKnown RBP eCLIP13.95□□□□□ -0.18
PACS1-209ENST00000529757 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 AGAP6Q5VW22 663 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 Q6ZPA2 131 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 ARRDC1Q8N5I2 433 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 OR5T2Q8NGG2 359 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
PACS1-209ENST00000529757 CBLN4Q9NTU7 201 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 IGKV1D-17A0A075B6S4 117 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 TRBV6-6A0A0A6YYG2 114 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 A6NNC1 897 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 PSPNO60542 156 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 DHFRP00374 187 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 CDK10Q15131 360 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 TATDN3Q17R31 274 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 Q6ZS49 121 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 TGIF2LYQ8IUE0 185 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 C1orf87Q8N0U7 546 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 CADM3Q8N126 398 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 PLPPR1Q8TBJ4 325 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 SLC25A21Q9BQT8 299 aaPredicted RBP13.95□□□□□ -0.18
PACS1-209ENST00000529757 Q9N2K0 584 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 EHFQ9NZC4 300 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 FLVCR2Q9UPI3 526 aa13.95□□□□□ -0.18
PACS1-209ENST00000529757 A0A0B4J293 547 aa13.94□□□□□ -0.18
PACS1-209ENST00000529757 POM121CA8CG34 1229 aa13.94□□□□□ -0.18
PACS1-209ENST00000529757 ARPC1BO15143 372 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms