RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DLX1P56177 255 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 P2RX3P56373 397 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 PPP3R1P63098 170 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 SCN1BQ07699 218 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 DYNC1I2Q13409 638 aaKnown RBP7.8□□□□□ -1.16
CHD7-208ENST00000528280 LRRC36Q1X8D7 754 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 SLC35E4Q6ICL7 350 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 TREML4Q6UXN2 200 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 Q6ZSV7 163 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 TRAPPC6BQ86SZ2 158 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 SATL1Q86VE3 508 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 C8orf59Q8N0T1 100 aaPredicted RBP7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR52N4Q8NGI2 321 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR4C13Q8NGP0 309 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR10AC1Q8NH08 325 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR52N1Q8NH53 320 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 ZNF596Q8TC21 504 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 RPS4Y2Q8TD47 263 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 THRSPQ92748 146 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 AJUBAQ96IF1 538 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 CITED1Q99966 193 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 BARHL1Q9BZE3 327 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 NPFFR1Q9GZQ6 430 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 PPA2Q9H2U2 334 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 TMEM138Q9NPI0 162 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 CNOT2Q9NZN8 540 aaKnown RBP7.8□□□□□ -1.16
CHD7-208ENST00000528280 OR6C3Q9NZP0 311 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 CKLFQ9UBR5 152 aa7.8□□□□□ -1.16
CHD7-208ENST00000528280 IGKV1-12A0A0C4DH73 117 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 PSPNO60542 156 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 IGKV1D-12P01611 117 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 HTR1DP28221 377 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 C21orf33P30042 268 aaPredicted RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 GABRA5P31644 462 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 CAPGP40121 348 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 PTGFRP43088 359 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 OR3A1P47881 315 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ETV1P50549 477 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 PROK1P58294 105 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 TAS2R43P59537 309 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ADARB1P78563 741 aaKnown RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 PRB3Q04118 309 aaPredicted RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 ST3GAL4Q11206 333 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 GPR176Q14439 515 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 CDK5R1Q15078 307 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 RSU1Q15404 277 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 SMN1Q16637 294 aaKnown RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 YIF1BQ5BJH7 314 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ZNF626Q68DY1 528 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ZNF529Q6P280 563 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 HEPN1Q6WQI6 88 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ASCL4Q6XD76 172 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 ZNF782Q6ZMW2 699 aaPredicted RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 CDH26Q8IXH8 852 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 Q8NFD4 153 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 OR4D6Q8NGJ1 314 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 OR2T6Q8NHC8 308 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 RFT1Q96AA3 541 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 SMIM19Q96E16 107 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 SPACA5Q96QH8 159 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 CLEC7AQ9BXN2 247 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 YTHDF1Q9BYJ9 559 aaKnown RBP7.79□□□□□ -1.16
CHD7-208ENST00000528280 ANKRD60Q9BZ19 345 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 CHST6Q9GZX3 395 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 METTL9Q9H1A3 318 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 TMEM133Q9H2Q1 129 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 TCF7L1Q9HCS4 588 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 PLCXD1Q9NUJ7 323 aa7.79□□□□□ -1.16
CHD7-208ENST00000528280 KMT2CQ8NEZ4 4911 aaKnown RBP7.78□□□□□ -1.16
CHD7-208ENST00000528280 ZNF729A6NN14 1252 aaPredicted RBP7.78□□□□□ -1.16
CHD7-208ENST00000528280 ODF3BA8MYP8 253 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 SIRPB1O00241 398 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 TOR1AO14656 332 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 GPX5O75715 221 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 CSTBP04080 98 aaKnown RBP7.78□□□□□ -1.16
CHD7-208ENST00000528280 CD1AP06126 327 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 CALCBP10092 127 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 BDKRB2P30411 391 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 BRS3P32247 399 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 ZNF93P35789 620 aaPredicted RBP7.78□□□□□ -1.16
CHD7-208ENST00000528280 CEACAM3P40198 252 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 SOX2P48431 317 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 SNU13P55769 128 aaKnown RBP7.78□□□□□ -1.16
CHD7-208ENST00000528280 ZP1P60852 638 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 AESQ08117 197 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 IL13RA2Q14627 380 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 FAM189A2Q15884 450 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 SSX2Q16385 188 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 KRBOX4Q5JUW0 171 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 ASPHD2Q6ICH7 369 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 Q6P435 159 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 SLC16A12Q6ZSM3 486 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 LINC00596Q86U02 117 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 ABHD12Q8N2K0 398 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 STX19Q8N4C7 294 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 OR51T1Q8NGJ9 327 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms