RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 BABAM2Q9NXR7 383 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 CLEC2DQ9UHP7 191 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
CAPN1-212ENST00000527887 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 TRBV2A0A0J9YWF9 115 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 H3BUI4 141 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 SLC22A1O15245 554 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 CD1AP06126 327 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 CD36P16671 472 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
CAPN1-212ENST00000527887 KIR3DL2P43630 455 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 EFNB2P52799 333 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 MTCP1P56278 107 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 EDDM3BP56851 147 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 CCDC58Q4VC31 144 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 TP53I3Q53FA7 332 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 SPIN3Q5JUX0 258 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 Q6ZTK2 550 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 PIFOQ8TCI5 191 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 EMG1Q92979 244 aaKnown RBP11.51□□□□□ -0.57
CAPN1-212ENST00000527887 SLAMF9Q96A28 289 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF714Q96N38 554 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 OR5M11Q96RB7 305 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 PTTG2Q9NZH5 202 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 LINC00312Q9Y6C7 94 aa11.51□□□□□ -0.57
CAPN1-212ENST00000527887 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ODF3BA8MYP8 253 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 F8VVB4 439 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 F8VWA3 439 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 MGST3O14880 152 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 HAND1O96004 215 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 IGHV1-8P0DP01 117 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF20P17024 532 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ATF1P18846 271 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 COX7A1P24310 79 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 DYNLT3P51808 116 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 BMXP51813 675 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 TRAM1Q15629 374 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 LY6EQ16553 131 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 LHFPL3Q86UP9 236 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 RDH10Q8IZV5 341 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 BATF2Q8N1L9 274 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 RPS4Y2Q8TD47 263 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-212ENST00000527887 FGGYQ96C11 551 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-212ENST00000527887 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ALG8Q9BVK2 526 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 ABCB10Q9NRK6 738 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 HHLA2Q9UM44 414 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
CAPN1-212ENST00000527887 IGKV1-9A0A0C4DH69 117 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 TMEM82A0PJX8 343 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 H3BMQ9 156 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 ALX3O95076 343 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 ARG1P05089 322 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 CSF1P09603 554 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 OCM2P0CE71 109 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-212ENST00000527887 AZGP1P25311 298 aaKnown RBP11.49□□□□□ -0.57
CAPN1-212ENST00000527887 PSMA1P25786 263 aaKnown RBP11.49□□□□□ -0.57
CAPN1-212ENST00000527887 OR12D2P58182 307 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 GRK1Q15835 563 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 CTF1Q16619 201 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 CNPY1Q3B7I2 92 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 CD200R1LQ6Q8B3 271 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF782Q6ZMW2 699 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-212ENST00000527887 SLC16A12Q6ZSM3 486 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 UBE2J1Q9Y385 318 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-212ENST00000527887 SESN1Q9Y6P5 492 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 WNK1Q9H4A3 2382 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 TGP01266 2768 aa11.49□□□□□ -0.57
CAPN1-212ENST00000527887 H3BSH0 61 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 J3QLW9 94 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 SH2D1BO14796 132 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 HSMCR30P0CW71 290 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF19P17023 458 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 GABRR1P24046 479 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 OR2G6Q5TZ20 316 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 SAXO1Q8IYX7 474 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 CFHR4Q92496 578 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 UFD1Q92890 307 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 HMG20AQ9NP66 347 aa11.48□□□□□ -0.57
CAPN1-212ENST00000527887 OR4C45A6NMZ5 311 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 OGG1O15527 345 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 PRKACAP17612 351 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 BCL3P20749 454 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 LMO1P25800 156 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 FGF9P31371 208 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms