RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 VWC2Q2TAL6 325 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SYT6Q5T7P8 510 aaPredicted RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 BCL2L15Q5TBC7 163 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 UBE2UQ5VVX9 321 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 MYPOPQ86VE0 399 aaPredicted RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 CATSPERDQ86XM0 798 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 RDH10Q8IZV5 341 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PRSS35Q8N3Z0 413 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 MS4A15Q8N5U1 240 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ZNF676Q8N7Q3 588 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ZFP41Q8N8Y5 198 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 TMEM185AQ8NFB2 350 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SLC24A4Q8NFF2 622 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 OR2G2Q8NGZ5 317 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 OR52I2Q8NH67 350 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 OR5AK2Q8NH90 309 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SLC25A40Q8TBP6 338 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 GHSRQ92847 366 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 UFD1Q92890 307 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SPSB1Q96BD6 273 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 CMBLQ96DG6 245 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PIK3IP1Q96FE7 263 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 DOK1Q99704 481 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 MRPS26Q9BYN8 205 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 BCL2L14Q9BZR8 327 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 COMMD4Q9H0A8 199 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 OR51B6Q9H340 312 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 RGCCQ9H4X1 137 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 FAM206AQ9NX38 181 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PTTG3PQ9NZH4 202 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ZNF319Q9P2F9 582 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 KCNN3Q9UGI6 736 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SLC22A13Q9Y226 551 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 LSM2Q9Y333 95 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 DIDO1Q9BTC0 2240 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 SPENQ96T58 3664 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 CACNA1CQ13936 2221 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 A0A0U1RQV5 110 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 PNMA8CA0A1B0GUJ8 204 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 A0A1B0GVI7 797 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 C5orf63A6NC05 138 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 GGT3PA6NGU5 568 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 TMEM212A6NML5 194 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 OR4C45A6NMZ5 311 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 DEFB108AA8MXU0 73 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ATP6V1G2-DDX39BF2Z307 99 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 CCRL2O00421 344 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 XRCC2O43543 280 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SYT7O43581 403 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 CTAG2O75638 210 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 RHBDL1O75783 438 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SERPINA3P01011 423 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 TTRP02766 147 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 TFAP2AP05549 437 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 UBCP0CG48 685 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 COX6B1P14854 86 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 PSMB9P28065 219 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 DDOSTP39656 456 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 KIR3DL2P43630 455 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 RPL5P46777 297 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 RPS23P62266 143 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 CTAG1AP78358 180 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 FAM3AP98173 230 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 BDH1Q02338 343 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ZNF92Q03936 586 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 MFGE8Q08431 387 aaPredicted RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 RIPPLY1Q0D2K3 151 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 CDK5R1Q15078 307 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ODF4Q2M2E3 257 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SNAI3Q3KNW1 292 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ACSM3Q53FZ2 586 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 YIF1BQ5BJH7 314 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 WDR38Q5JTN6 314 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 GLYATL3Q5SZD4 288 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 LIPKQ5VXJ0 399 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 DMKNQ6E0U4 476 aaPredicted RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 XAF1Q6GPH4 301 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ADAM5Q6NVV9 412 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 METAP1DQ6UB28 335 aaPredicted RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 PGAP1Q75T13 922 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 MRPL21Q7Z2W9 205 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 CCDC190Q86UF4 302 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 COMMD2Q86X83 199 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ZNF101Q8IZC7 436 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 GCSAMQ8N6F7 178 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 ACBD4Q8NC06 268 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 CCDC54Q8NEL0 328 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 NUP37Q8NFH4 326 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 OR8B12Q8NGG6 310 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 OR2AE1Q8NHA4 323 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SYNPRQ8TBG9 265 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 OR51E1Q8TCB6 317 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 KLF14Q8TD94 323 aaPredicted RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 TMEM203Q969S6 136 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 FAM46BQ96A09 425 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 PHF21AQ96BD5 680 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms