RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CHD6Q8TD26 2715 aa2.7□□□□□ -1.98
CD44-219ENST00000525685 NBEAQ8NFP9 2946 aa2.7□□□□□ -1.98
CD44-219ENST00000525685 NCOA6Q14686 2063 aaPredicted RBP2.7□□□□□ -1.98
CD44-219ENST00000525685 FAM208BQ5VWN6 2430 aa2.7□□□□□ -1.98
CD44-219ENST00000525685 DSPP15924 2871 aaKnown RBP2.7□□□□□ -1.98
CD44-219ENST00000525685 IGSF10Q6WRI0 2623 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 A0A0B4J2E0 115 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 A0A0J9YW62 118 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 LOC100131303A0A0U1RQF7 123 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SERTM2A0A1B0GWG4 89 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 A0A1B0GX12 115 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 HELTA6NFD8 242 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SLC22A20A6NK97 555 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 TMEM210A6NLX4 147 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 C19orf84I3L1E1 186 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 FAAHO00519 579 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 NDUFA2O43678 99 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 CXCL13O43927 109 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 PFDN1O60925 122 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 AQP8O94778 261 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SNAPINO95295 136 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 TGM6O95932 706 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 STAG3L3P0CL85 134 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 IGLL1P15814 213 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RRM2P31350 389 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 TAGLN2P37802 199 aaKnown RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 EIF1P41567 113 aaKnown RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 IDH2P48735 452 aaKnown RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 CAV2P51636 162 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ZNF136P52737 540 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 WNT4P56705 351 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RGS8P57771 180 aaPredicted RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 PSME3P61289 254 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 HOXC5Q00444 222 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 LIPEQ05469 1076 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SCRN3Q0VDG4 424 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RAB40BQ12829 278 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 MERTKQ12866 999 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ART3Q13508 389 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 PON3Q15166 354 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SGCAQ16586 387 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 TRIM16LQ309B1 348 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 KCTD21Q4G0X4 260 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RIPPLY2Q5TAB7 128 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 REEP3Q6NUK4 255 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 C3orf33Q6P1S2 294 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 DHRS4L2Q6PKH6 230 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ZNF550Q7Z398 422 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 GRINAQ7Z429 371 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SLC30A8Q8IWU4 369 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 MICU2Q8IYU8 434 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 PGAM4Q8N0Y7 254 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ATP6V1C2Q8NEY4 427 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 GPR32P1Q8NGA4 272 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OR4D11Q8NGI4 311 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OR52M1Q8NGK5 317 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OR10D3Q8NH80 312 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OR2V1Q8NHB1 315 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ANGPTL6Q8NI99 470 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ZNF563Q8TA94 476 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 FNDC9Q8TBE3 224 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 NANPQ8TBE9 248 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 FANK1Q8TC84 345 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 TMEM234Q8WY98 164 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RPL3LQ92901 407 aaKnown RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 CMTM5Q96DZ9 223 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 C4orf36Q96KX1 117 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OPALINQ96PE5 141 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SLC29A1Q99808 456 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ARHGDIGQ99819 225 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 DHRS9Q9BPW9 319 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 HOPXQ9BPY8 73 aaPredicted RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 ECSITQ9BQ95 431 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 WFDC6Q9BQY6 131 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 SRXN1Q9BYN0 137 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 OR11A1Q9GZK7 315 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 C6orf62Q9GZU0 229 aaPredicted RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 CALHM2Q9HA72 323 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 EFCAB1Q9HAE3 211 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 CACYBPQ9HB71 228 aaKnown RBP2.69□□□□□ -1.98
CD44-219ENST00000525685 CTPS2Q9NRF8 586 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ACER3Q9NUN7 267 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 GID8Q9NWU2 228 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 RPS6KB2Q9UBS0 482 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 CHRNA9Q9UGM1 479 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ZNF221Q9UK13 617 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 GSTK1Q9Y2Q3 226 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 ARHGAP21Q5T5U3 1957 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 NINQ8N4C6 2090 aa2.69□□□□□ -1.98
CD44-219ENST00000525685 PHF3Q92576 2039 aaKnown RBP2.68□□□□□ -1.98
CD44-219ENST00000525685 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
CD44-219ENST00000525685 IGKV1D-42A0A075B6H8 117 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 TMED7-TICAM2A0A0A6YYA0 188 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 IGHV3-15A0A0B4J1V0 119 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 A0A1B0GWA3 101 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 A0A1W2PNV4 684 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 NKX2-6A6NCS4 301 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 PRORSD1PA6NEY8 169 aa2.68□□□□□ -1.98
CD44-219ENST00000525685 CPSF4LA6NMK7 179 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms