RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 FHAD1B1AJZ9 1412 aa3.96□□□□□ -1.77
USP47-204ENST00000525078 EEA1Q15075 1411 aa3.96□□□□□ -1.77
USP47-204ENST00000525078 A0A087WWV3 80 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 TEX50A0A1B0GTY4 177 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 PLAC8L1A1L4L8 177 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 DISC1C4P0D8 188 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 TRIM49D1C9J1S8 452 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 KRBOX1C9JBD0 128 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 PLIN3O60664 434 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 OR2A4O95047 310 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 EPPINO95925 133 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 CA2P00918 260 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 IFNA14P01570 189 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 REG1AP05451 166 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 OR4A8P0C604 315 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 OR4Q2P0C623 313 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 CECR9P0C854 216 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 CRISP2P16562 243 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 CXCL2P19875 107 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 REG1BP48304 166 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 CDK9P50750 372 aaKnown RBP3.96□□□□□ -1.78
USP47-204ENST00000525078 GFERP55789 205 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 H2BFSP57053 126 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 IRF4Q15306 451 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 ZNF404Q494X3 552 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 LIN52Q52LA3 116 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 TMEM97Q5BJF2 176 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 ATAD3CQ5T2N8 411 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 GSG1LQ6UXU4 331 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
USP47-204ENST00000525078 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 SLC35G3Q8N808 338 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 C20orf203Q8NBC4 194 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 OR10G4Q8NGN3 311 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 SPPL2BQ8TCT7 592 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 TWIST2Q8WVJ9 160 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 RASSF5Q8WWW0 418 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 PTX4Q96A99 478 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 FXYD5Q96DB9 178 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 OR2A7Q96R45 310 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 PLEKHF1Q96S99 279 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 SIGMAR1Q99720 223 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 TMEM109Q9BVC6 243 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 ASB7Q9H672 318 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 PARP11Q9NR21 331 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 BATF3Q9NR55 127 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 C19orf12Q9NSK7 152 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
USP47-204ENST00000525078 A0A0G2JMP0 313 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 A0A0X1KG70 313 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 A0A1B0GV72 72 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 A0A1W2PPR1 153 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 BTNL10A8MVZ5 291 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 M0QYV0 167 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CHP2O43745 196 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 OR2B3O76000 313 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 KCNK2O95069 426 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 SLC25A14O95258 325 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 CYB5R3P00387 301 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 HBZP02008 142 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 SNRPAP09012 282 aaKnown RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 CST2P09228 141 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 FOLR2P14207 255 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 NMUP48645 174 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 PSME3P61289 254 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 HPCAP84074 193 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CDK5Q00535 292 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 PAFAH1B3Q15102 231 aaKnown RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 KRTAP27-1Q3LI81 207 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CENPWQ5EE01 88 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 SLC25A30Q5SVS4 291 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 SPATA31B1PQ5VZV4 182 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 TMEM42Q69YG0 159 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 ZNF544Q6NX49 715 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 FAAP20Q6NZ36 180 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 FBXL22Q6P050 247 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 POM121L12Q8N7R1 296 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 OR52P1PQ8NH57 321 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 RNF157Q96PX1 679 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CMSS1Q9BQ75 279 aaKnown RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 RTBDNQ9BSG5 229 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 KIFC1Q9BW19 673 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 EBPLQ9BY08 206 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 SAMD10Q9BYL1 202 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 NMNAT1Q9HAN9 279 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 DDX19AQ9NUU7 478 aaKnown RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 TAS2R5Q9NYW4 299 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 PAK5Q9P286 719 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 POMPQ9Y244 141 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 KLF13Q9Y2Y9 288 aaPredicted RBP3.95□□□□□ -1.78
USP47-204ENST00000525078 SLC22A7Q9Y694 548 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CHD4Q14839 1912 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 CLUHO75153 1309 aa3.95□□□□□ -1.78
USP47-204ENST00000525078 PBRM1Q86U86 1689 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 PCF11O94913 1555 aaKnown RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 BAZ1AQ9NRL2 1556 aaPredicted RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 IFITM10A6NMD0 228 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms