RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 RSRP1Q9BUV0 290 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 ELOVL1Q9BW60 279 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 PBOV1Q9GZY1 135 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 TAS2R1Q9NYW7 299 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
NKX3-1-202ENST00000523261 IGKV1-27A0A075B6S5 117 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 IGHV1-3A0A0C4DH29 117 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 TMEM269A0A1B0GVZ9 245 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 FUOMA2VDF0 154 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF729A6NN14 1252 aaPredicted RBP10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 BBIP1A8MTZ0 92 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 SIRPB1O00241 398 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 GSTA4O15217 222 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 SELENOFO60613 162 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 LGALS1P09382 135 aaKnown RBP10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 NUDT2P50583 147 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 SMIM11AP58511 58 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 LIPEQ05469 1076 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF816Q0VGE8 651 aaPredicted RBP10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF146Q15072 292 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 CROCCP2Q86T23 111 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 MOB3BQ86TA1 216 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 GTSCR1Q86UQ5 136 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 RP9Q8TA86 221 aaKnown RBP10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 TMEM106AQ96A25 262 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 LRGUKQ96M69 825 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 GID8Q9NWU2 228 aa10.57□□□□□ -0.72
NKX3-1-202ENST00000523261 FAT2Q9NYQ8 4349 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 A6NIN4 97 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 HSD17B6O14756 317 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 ENTPD6O75354 484 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 CGB3P0DN86 165 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 CGB7P0DN87 165 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 CDC42P60953 191 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 MFGE8Q08431 387 aaPredicted RBP10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 GALEQ14376 348 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 SLC25A26Q70HW3 274 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 FAM162AQ96A26 154 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 COQ2Q96H96 371 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 TSSK6Q9BXA6 273 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 NUFIP1Q9UHK0 495 aaKnown RBP10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 AP3M1Q9Y2T2 418 aa10.56□□□□□ -0.72
NKX3-1-202ENST00000523261 KBTBD11-OT1A0A1B0GTJ5 212 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 H0Y980 276 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 RGS11O94810 467 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 NCK1P16333 377 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 NPBWR2P48146 333 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 REG1BP48304 166 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 F2RL1P55085 397 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 WDR93Q6P2C0 686 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 TMEM104Q8NE00 496 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 OR8H1Q8NGG4 311 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 TLCD1Q96CP7 247 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 PLEKHA3Q9HB20 300 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 OR6C3Q9NZP0 311 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF107Q9UII5 783 aaPredicted RBP10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 V9GYS6 101 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 DNAH6Q9C0G6 4158 aa10.55□□□□□ -0.72
NKX3-1-202ENST00000523261 TRBV2A0A0J9YWF9 115 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 RIIAD1A6NNX1 92 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 OR2H2O95918 312 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 MOSP00540 346 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 IFNGP01579 166 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 TTRP02766 147 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 CALCBP10092 127 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF3P17036 446 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 GNG10P50151 68 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 SNU13P55769 128 aaKnown RBP10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 SPIN3Q5JUX0 258 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 METTL21CQ5VZV1 264 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 Q8IYB0 196 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 FAM58AQ8N1B3 248 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 OR14K1Q8NGZ2 314 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 CMC2Q9NRP2 79 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 ING3Q9NXR8 418 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 BAIAP2Q9UQB8 552 aa10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
NKX3-1-202ENST00000523261 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 NME4O00746 187 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 CNIH1O95406 144 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 CSN2P05814 226 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PRKACAP17612 351 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 ALOX5APP20292 161 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 CD1BP29016 333 aa10.53□□□□□ -0.72
NKX3-1-202ENST00000523261 PRR20EP86478 221 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms